| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1521 |
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| Symbol | |
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| ID | 6520017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 1465876 |
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| End bp | 1467249 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642746633 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_002114436 |
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| Protein GI | 194738332 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0251273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAAGT ATACCAGTGA AGCGCGTCAG CTATTAGCGT TAGCGATACC GGTGATCCTT
GCGCAAGTGG CACAGACCGC AATGGGATTC GTCGATACCG TCATGGCAGG AGGCTATAGC
GCTACGGACA TGGCTGCCGT CGCTATCGGC ACCTCTATCT GGCTTCCCGC CATTTTGTTT
GGTCACGGCT TACTGCTGGC CTTGACGCCT GTGATTGCGC AACTCAATGG CTCCGGCCGT
CGTGAGCGTA TCGCGCATCA GGTTCGACAA GGGTTCTGGC TGGCGGGCTT TGTCTCCGTG
CTGGTGATGA TCGTCCTGTG GAATGCCGGA TACATTATCC GCTCTATGCA TAATATTGAT
CCGGCGCTGG CCGATAAAGC CGTGGGTTAT CTTCGCGCGC TACTGTGGGG CGCGCCAGGA
TACCTTTTCT TTCAGGTAGC GCGAAACCAG TGCGAAGGTC TTGCCAAAAC CAAACCGGGT
ATGGTGATGG GATTTTTGGG CCTGCTGGTG AATATTCCGG TGAACTATAT TTTTATCTAT
GGCCATTTTG GTATGCCTGA ACTCGGCGGT ATCGGCTGCG GCGTTGCGAC CGCGGCGGTC
TATTGGGTGA TGTTTATCGC CATGCTTTCT TACATTAAAC ACGCGCGTTC AATGCGTGAT
ATTCGTAATG AAACAGGCTT TGGCAAACCC GATAGCGTCG TCATGAAGCG CCTGATTCAA
CTAGGGTTAC CGATTGCGCT GGCGCTGTTC TTTGAAGTGA CGTTGTTTGC GGTCGTTGCG
CTGCTGGTTT CGCCATTAGG TATTGTGGAT GTCGCGGGTC ATCAGATTGC GCTTAACTTT
AGCTCGCTGA TGTTCGTACT GCCGATGTCG CTGGCTGCGG CGGTAACGAT TCGAGTGGGT
TATCGTCTGG GCCAGGGCTC AACGCTGGAT GCGCAAACCG CAGCGCGTAC CGGTTTAGGC
GTCGGCATTT GTATGGCTGT GGTTACCGCG ATCTTTACCG TTACTCTGCG TAAGCATATT
GCTTTGCTCT ACAATGACAA CCCCGAGGTC GTGGCGCTTG CCGCGCAATT AATGCTGCTC
GCCGCGGTTT ATCAGATTTC CGACTCTATA CAGGTTATCG GCAGCGGTAT TCTGCGCGGT
TATAAAGATA CGCGTTCCAT CTTTTTTATC ACCTTTACCG CCTACTGGGT GTTAGGTTTA
CCCAGCGGTT ATATCCTGGC GTTAACGGAT CTGGTGGTGG ATCGTATGGG ACCGGCAGGC
TTCTGGATGG GGTTCATCAT CGGCCTGACC TCGGCGGCGG TGTTAATGAT GCTACGGATG
CGCTATCTAC AACGTCAGCC GTCCGCCATC ATTTTGCAGC GCGCTGCGCG ATAA
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| Protein sequence | MQKYTSEARQ LLALAIPVIL AQVAQTAMGF VDTVMAGGYS ATDMAAVAIG TSIWLPAILF
GHGLLLALTP VIAQLNGSGR RERIAHQVRQ GFWLAGFVSV LVMIVLWNAG YIIRSMHNID
PALADKAVGY LRALLWGAPG YLFFQVARNQ CEGLAKTKPG MVMGFLGLLV NIPVNYIFIY
GHFGMPELGG IGCGVATAAV YWVMFIAMLS YIKHARSMRD IRNETGFGKP DSVVMKRLIQ
LGLPIALALF FEVTLFAVVA LLVSPLGIVD VAGHQIALNF SSLMFVLPMS LAAAVTIRVG
YRLGQGSTLD AQTAARTGLG VGICMAVVTA IFTVTLRKHI ALLYNDNPEV VALAAQLMLL
AAVYQISDSI QVIGSGILRG YKDTRSIFFI TFTAYWVLGL PSGYILALTD LVVDRMGPAG
FWMGFIIGLT SAAVLMMLRM RYLQRQPSAI ILQRAAR
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