| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1511 |
|---|
| Symbol | |
|---|
| ID | 6515306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1459595 |
|---|
| End bp | 1460896 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642746623 |
|---|
| Product | type III secretion system ATPase |
|---|
| Protein accession | YP_002114428 |
|---|
| Protein GI | 194738136 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.612036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATG AATTGATGCA ACGTCTGAGG CTGAAATATC CGCCCCCTGA TGGTTATTGT
CGATGGGGCC GAATTCAGGA TGTCAGCGCA ACGTTGTTAA ATGCGTGGTT GCCTGGGGTA
TTTATGGGCG AGTTGTGCTG TATAAAGCCA GGAGAAGAAC TTGCTGAAGT CGTGGGGATT
AATGGCAGCA AAGCTTTGCT ATCTCCTTTT ACGAGTACTA TCGGACTTCA CTGCGGGCAG
CAAGTGACGG CCTTAAGGCG ACGCCATCAG GTTCCCGTGG GCGAAGCGTT ATTAGGGCGA
GTCATTGATG GCTTTGGTCG TCCCCTTGAT GGCCGCGAAC TGCCCGACGT CTGCTGGAAA
GACTATGATG CAATGCCTCC TCCCGCAATG GTTCGACAGC CTATCACTCA ACCATTAATG
ACGGGGATTC GCGCTATTGA TAGCGTTGCG ACCTGTGGCG AAGGGCAACG AGTGGGTATT
TTTTCTGCTC CTGGCGTGGG GAAAAGCACG CTTCTGGCGA TGCTGTGTAA TGCTCCAGAC
GCAGACAGTA ATGTTCTGGT GTTAATTGGT GAGCGTGGAC GAGAAGTCCG CGAATTCATC
GATTTTACAC TGTCTGAAGA GACCCGAAAA CGTTGTGTCA TTGTTGTCGC AACTTCTGAC
AGACCCGCCT TAGAGCGCGT GAGGGCGCTG TTTGTGGCCA CCACGATAGC AGAATTTTTT
CGCGATAATG GAAAGCGAGT CGTCTTGCTT GCCGACTCAC TGACGCGTTA TGCCAGGGCC
GCGCGGGAAA TCGCTCTGGC CGCCGGAGAG ACCGCAGTTT CTGGAGAATA TCCGCCAGGC
GTATTTAGTG CATTGCCACG ACTTTTAGAA CGTACAGGAA TGGGAGAAAA AGGCAGTATT
ACCGCATTTT ATACGGTACT GGTGGAAGGC GATGATATGA ATGAGCCGTT GGCGGATGAA
GTCCGTTCAC TGCTTGACGG ACATATTGTG CTATCCCGAC GGCTTGCAGA GAGGGGGCAT
TATCCTGCCA TTGACGTGTT GGCAACGCTC AGCCGCGTTT TTCCAGTCGT TACCAGCCAT
GAGCATCGTC AACTGGCGGC GATATTGCGA CGGTGCCTGG CGCTTTACCA GGAGGTTGAA
CTGTTAATAC GCATTGGGGA ATACCAGCGA GGAGTTGATA CAGATACTGA CAAAGCCATT
GATACCTATC CGGATATTTG CACATTTTTG CGACAAAGTA AGGATGAAGT ATGCGGACCC
GAGCTACTCA TAGAAAAATT ACACCAAATA CTCACCGAGT GA
|
|---|
| Protein sequence | MKNELMQRLR LKYPPPDGYC RWGRIQDVSA TLLNAWLPGV FMGELCCIKP GEELAEVVGI
NGSKALLSPF TSTIGLHCGQ QVTALRRRHQ VPVGEALLGR VIDGFGRPLD GRELPDVCWK
DYDAMPPPAM VRQPITQPLM TGIRAIDSVA TCGEGQRVGI FSAPGVGKST LLAMLCNAPD
ADSNVLVLIG ERGREVREFI DFTLSEETRK RCVIVVATSD RPALERVRAL FVATTIAEFF
RDNGKRVVLL ADSLTRYARA AREIALAAGE TAVSGEYPPG VFSALPRLLE RTGMGEKGSI
TAFYTVLVEG DDMNEPLADE VRSLLDGHIV LSRRLAERGH YPAIDVLATL SRVFPVVTSH
EHRQLAAILR RCLALYQEVE LLIRIGEYQR GVDTDTDKAI DTYPDICTFL RQSKDEVCGP
ELLIEKLHQI LTE
|
|---|
| |