Gene SeSA_A1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1488 
Symbol 
ID6517562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1439227 
End bp1439955 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content54% 
IMG OID642746600 
Producttranscriptional regulator, MerR family protein 
Protein accessionYP_002114405 
Protein GI194734910 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.372841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.479872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATT CTATCGGCGA ATTTGCCAGA CTATGCGGTA TCAATGCCGC CACGCTAAGG 
GCATGGCAGC GACGCTATGG TTTATTGAAA CCGCAGCGTA CTGATGGCGG GCATCGCTTA 
TACAGCGATG ACGATATTCG ACAAGCGCTT AGCATCCTCG ACTGGGTGAG AAAAGGCGTA 
CCGATAAGCC AGGTCAAACC CTTACTATCG CGTCCGGTCA TTCGCCTGGG CGATAACTGG 
ATAACGATTC AGGAGACGAT GCTTCAACAT CTCCACGAAG GGCGAATTGA CGCGCTGCGG 
CAGTTGATTT ATGACTGTGG CCGGGAATAT CCTCGCGCAG AACTGGTGAC CCATTTATTG 
CGTCCGTTGC GCAGCAAAGT GTCCGCGCAT CTTCCCGCCG TGATGACGCT GCGCGAAATA 
CTGGATGGCA TCATTATTGC CTACACCTCT TTTTGCCTTG AAGGCGACAG AAAAGCGCCT 
GGCAACAATG CCTTTATTAG CGGATGGCAT CTCTCGGATC ACTGTGAAAT CTGGCTGGAA 
GCGTTGACTC GTACCGGACA AGAGCTGCGG CTCAATGTGC TTCCCTCTCC ACCAGCCATA 
CTGGCGCCCG AGCTGTTCGC CCAGAGAAAA TGGTTCCTGG TGACCACCGG AAAGCTCACT 
ACCGGGCAGA AAAAACAGCT TGCCCAGTGG CGCAACGTGG TCGCTTCGCT GGAGGTTATC 
ACACTATAA
 
Protein sequence
MSYSIGEFAR LCGINAATLR AWQRRYGLLK PQRTDGGHRL YSDDDIRQAL SILDWVRKGV 
PISQVKPLLS RPVIRLGDNW ITIQETMLQH LHEGRIDALR QLIYDCGREY PRAELVTHLL 
RPLRSKVSAH LPAVMTLREI LDGIIIAYTS FCLEGDRKAP GNNAFISGWH LSDHCEIWLE 
ALTRTGQELR LNVLPSPPAI LAPELFAQRK WFLVTTGKLT TGQKKQLAQW RNVVASLEVI 
TL