Gene SeSA_A1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1476 
Symbol 
ID6517524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1425708 
End bp1427051 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content50% 
IMG OID642746589 
Productamino acid transporter 
Protein accessionYP_002114394 
Protein GI194734175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.202307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.161402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TCAAAAAATT GTCTCTTACC GATTTAGTGC TTTATGGTCT GGTGTTTATG 
GTGCCTATCG CGCCAGTCTC TCTTTATGGC GTCGTTTATA ATCTTTCGCA CGGTATGGTT 
GCGCTGGTTT ATATTATTGG CGCGATCGCG ATGTTTTTTA CCGCGTACAG CTACTCTACC 
TTATCGCAGC ATATCTCCTC GTCGGGTTCG GCCTATGCGT ATGCTGGCGT ATGCATTAAT 
CCCGCCGTAG GGTTTCTGAC CGGATGGATA TTACTGCTGG ATTATCTTTT GTTCCCTACG 
CTCGTAGCTG TGCTGGGCGG TGTCGCGGTC CACGCTATTT TACCGCAAAT CCCTGTCTGG 
GTCTGGCCGT TGATTTATGT GGCTATTGGC ACCGGAGTCA ACTATCTCGG GATACAGCAA 
ACGGCGAAAT TCGATAAGTT ACTGGTCTTT ATTCAACTCG GTATTCTGGC GATTTTCGTG 
CTACTCATTG TCCGTCTGAT GATGCTGGAC AGTAGTCAGA TAACGCTTTC CTTCCGGCCT 
TTTTTCAATT CACAGTGGTT CACTCCTGGG CTCATCGCGA CGGCGATTTC GGTGGCGGCG 
CTGAACTTTC TCGGCTTTGA CGCTATCAGT ACATTAAGTG AAGAAAGCGA AGGCGGGGGA 
CGCGCCGTCA GTAAAGCAAC GCTGTTGGCG TTAGTTTTGG CGACGGTACT GTTTATTATC 
GTTGTGGCGT TTGCGGCGTT CGCCACCGGT AATGTCGACC GCTTCGCGGA AGGTAATGCG 
ACGAATGAAG CATTTTTCAC CATTGCCGGC AACGTTGGCG GTATCTGGCT CAAAGTGGCG 
TTTTCCATCA TTGTGGCGTT TGTGTGCGCC GTCGGCAACA TTATTACCGC GCAAACGGCG 
GTGTCCAGAG TGCTATTTTC AATGGGGCGC GACCGAATGT TGCCCGCCTT CCTCGCTCAC 
GTCCATACCA CGCGTAAAAC GCCGGATTAT GCCATTCTGT TTACCGGCGG CGTCACCCTG 
CTGCTCAGCT ACCTGTTTTC CGGCAAGATT GAATCTATCT CCACGCTGGT GAACTTTGGC 
GCGCTTTTCG CTTTTTTTGT CGTGAACCTA TGTGTGTTTA TCCTGTTCAA TTTCCGGATG 
AAAGCCCAGC GGCGCATTTT CGCCCATGTC ATTTCGCCGA TCATGGGGAT GATCGTCATC 
GGCTACGTCT GTTTAAACAT GAACATTCAC GCTCTGATAC TCGGAATTAG CTGGGCGGCG 
ATCGGGATAG CGATACTGTG CTACCGAAAA GCACACAACC AAAACATCGC CATCGACCTG 
GAAGGCAAAA AGTTGCTCGA TTGA
 
Protein sequence
MKKVKKLSLT DLVLYGLVFM VPIAPVSLYG VVYNLSHGMV ALVYIIGAIA MFFTAYSYST 
LSQHISSSGS AYAYAGVCIN PAVGFLTGWI LLLDYLLFPT LVAVLGGVAV HAILPQIPVW 
VWPLIYVAIG TGVNYLGIQQ TAKFDKLLVF IQLGILAIFV LLIVRLMMLD SSQITLSFRP 
FFNSQWFTPG LIATAISVAA LNFLGFDAIS TLSEESEGGG RAVSKATLLA LVLATVLFII 
VVAFAAFATG NVDRFAEGNA TNEAFFTIAG NVGGIWLKVA FSIIVAFVCA VGNIITAQTA 
VSRVLFSMGR DRMLPAFLAH VHTTRKTPDY AILFTGGVTL LLSYLFSGKI ESISTLVNFG 
ALFAFFVVNL CVFILFNFRM KAQRRIFAHV ISPIMGMIVI GYVCLNMNIH ALILGISWAA 
IGIAILCYRK AHNQNIAIDL EGKKLLD