Gene SeSA_A1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1456 
Symbol 
ID6518185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1405322 
End bp1406557 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content47% 
IMG OID642746572 
Producttransporter major facilitator family 
Protein accessionYP_002114377 
Protein GI194736393 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0765913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.139077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGA ACAAGGCTCG CAACATGCCA TATTTGCTGG CTGTTATCTG CATTTATTTT 
AGTTACTTTC TCCACGGCAT GAGTGTTATT ACACTAGCCC AGAACATGAC TTCCCTTGCA 
CAGAAATTCT CCACGGATAG TGCCGGTATC GCCTATTTAA TCTCTGGCAT TGGTCTTGGC 
CGTCTGGTCA GTATTTTATT CTTTGGCGTA CTGTCCGATA AATTTGGCCG TCGGGCAATA 
ATACTGCTTG GCGCCGTACT ATATATGCTG TTTTTCTTCG GTATTCCCGC CAGTCCTAAC 
CTGATGATCG CTTTCATATT AGCGGTGTGT GTCGGCGTGG CGAACTCCGC GCTGGATACC 
GGCGGATACC CTGCATTAAT GGAGTGTTTT CCCAAAGCAT CGGGCTCGGC AGTTATTCTG 
GTTAAAGCGA TGGTCTCTTT TGGGCAAATG ATTTATCCCC TTATTGTCAG CGCCTTGTTA 
GTCAACCATA TCTGGTACGG CTACGCGGTG GTAATCCCCG GTATCCTTTT CGTCCTCATC 
ACGTTGATGC TGTTGAAAAG CCGCTTTCCC AGCCAACTTG TCGATGCCAG TATTGCGAAA 
GAATTACCCC AGATGAACAG TACTCCCCTC GTCTGGCTGG AAGGCGTAGC TTCCGTTTTA 
TTTGGCGTCG CCGCGTTCTC AACCTTCTAT GTGATTGTGG TCTGGATGCC TAAATATGCG 
ATGGCCTTCG CCGGAATGGC GGAATCCGAC GCGCTGAAAA CCATCTCTTA TTACAGTATG 
GGATCGTTGG TCTGCGTGTT TATTTTTGCC GCATTGCTGA AAAAAATGGT TCGCCCCATC 
TGGGCCAATG TTTTCAATGC CGGGCTGGCG ACACTCACCG CTGCGGCAAT TTACCTGTAT 
CCCTCGCCAC TGATCTGTAA CGCTGGCGCC TTCGTGATTG GTTTTTCCGC TGCTGGAGGT 
ATTTTACAAT TAGGTGTATC GGTCATGTCG GAATTTTTCC CTAAGAGTAA AGCTAAAGTC 
ACCAGTATAT ATATGATGAT GGGGGGCGTT GCTAACTTTA TTATCCCACT GATTACCGGT 
TATCTCTCTA CTATTGGCCT GCAATATATC ATTTTGTTAG ATTTTGCCTT TGCACTACTG 
ACATTTATCA CCGCCATTAT TGTATTTATT CGCTATTATC GCGTATTTAA GATCCCGCAA 
AACGATGTCC GATTTGGCGA GCGTTATTTC CAGTAA
 
Protein sequence
MSQNKARNMP YLLAVICIYF SYFLHGMSVI TLAQNMTSLA QKFSTDSAGI AYLISGIGLG 
RLVSILFFGV LSDKFGRRAI ILLGAVLYML FFFGIPASPN LMIAFILAVC VGVANSALDT 
GGYPALMECF PKASGSAVIL VKAMVSFGQM IYPLIVSALL VNHIWYGYAV VIPGILFVLI 
TLMLLKSRFP SQLVDASIAK ELPQMNSTPL VWLEGVASVL FGVAAFSTFY VIVVWMPKYA 
MAFAGMAESD ALKTISYYSM GSLVCVFIFA ALLKKMVRPI WANVFNAGLA TLTAAAIYLY 
PSPLICNAGA FVIGFSAAGG ILQLGVSVMS EFFPKSKAKV TSIYMMMGGV ANFIIPLITG 
YLSTIGLQYI ILLDFAFALL TFITAIIVFI RYYRVFKIPQ NDVRFGERYF Q