Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1455 |
Symbol | |
ID | 6515968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1404389 |
End bp | 1405255 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642746571 |
Product | quinate/shikimate dehydrogenase |
Protein accession | YP_002114376 |
Protein GI | 194736749 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.206578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.118327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTA CCGCAAAATA TGAGTTAATT GGTCTTATGG CGTATCCTAT CCGTCATAGC TTATCGCCCG AAATGCAAAA CAAAGCGTTA GAAAAAGCGG GGCTACCCTA TACCTATATG GCTTTCGAAG TGGATAACAC GACGTTTGCC AGCGCCATTG AAGGACTGAA AGCATTAAAA ATGCGCGGTA CGGGCGTCTC CATGCCAAAC AAACAGCTCG CGTGTGAGTA TGTCGATGAA TTAACGCCAG CAGCAAAACT GGTTGGCGCT ATCAACACCA TTGTTAATGA TGACGGCTAT CTACGCGGCT ACAATACGGA TGGTACGGGC CATATTCGGG CAATTAAAGA AAGCGGTTTC GATATTCGGG GAAAAACCAT GGTGCTGCTC GGCGCGGGAG GCGCGGCTAC CGCCATTGGC GCCCAGGCAG CCATTGAAGG CATTAAGGAA ATTAAACTGT TTAACCGTAA AGATGACTTT TTCGAAAAAG CGGTTGCCTT TGCGAAGCGG GTGAATGAAA ACACCGATTG CGTCGTTACC GTCACCGATC TTGCCGATCA GCACGCTTTT ACTGAAGCGC TTGCCAGCGC AGATATTCTG ACGAACGGTA CCAAAGTTGG CATGAAACCA TTGGAGAACG AATCCCTGAT CGGCGATGTT TCCCTGCTCC GCCCTGAATT GCTGGTCACC GAATGTGTTT ATAATCCGCA TATGACAAAG TTATTGCAGC AGGCGCAACA AGCTGGTTGC AAAACAATTG ATGGTTACGG CATGTTGTTA TGGCAAGGAG CCGAACAGTT TGAACTGTGG ACAGGAAAAG CATTTCCATT GGACTATGTG AAGCAGGTGA TGGGATTCAC AGCCTGA
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Protein sequence | MDVTAKYELI GLMAYPIRHS LSPEMQNKAL EKAGLPYTYM AFEVDNTTFA SAIEGLKALK MRGTGVSMPN KQLACEYVDE LTPAAKLVGA INTIVNDDGY LRGYNTDGTG HIRAIKESGF DIRGKTMVLL GAGGAATAIG AQAAIEGIKE IKLFNRKDDF FEKAVAFAKR VNENTDCVVT VTDLADQHAF TEALASADIL TNGTKVGMKP LENESLIGDV SLLRPELLVT ECVYNPHMTK LLQQAQQAGC KTIDGYGMLL WQGAEQFELW TGKAFPLDYV KQVMGFTA
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