Gene SeSA_A1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1451 
Symbol 
ID6517934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1399706 
End bp1400596 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content42% 
IMG OID642746567 
Producttranscriptional regulator, AraC family protein 
Protein accessionYP_002114372 
Protein GI194737786 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0743909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.362871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGC GCTGTTTTGA CTCCGCCGCG GAGACGATTT TTGAACAGGA CAAGACCCCT 
CGATTTTCAC GTTTTGTCAT TAGCGATGAT CCAAACTGGG AGTCTGGCCA TCATATGCAT 
GATAATGAAA CAGAGCTTAT TTACGTCAAA AAAGGGATAG CCAGGTTAAT TATTGACTCT 
TCACTCTACG TCGCGCATGC GGACGATATT GTCGTCGTTG AGCGGGGGCG GCTACACGCT 
GTAGCATCCG ACAGCAATTC GCCGGCTACC ACCTATACCT GTGCGCTGTA TGGGTTTTGT 
TTTCCAGGTT GGGAAGAAAA CCAACTATTG CAGAGTCATT CCTGTCCGGT GGTTTCCGTG 
GTTCAGGGGA AAGAGGTCAT TAAAAGTATC TTTAATGAAT TAAGCGTGTT ACTTCCGCAG 
GGGAAAAATG TATTGGCTTC CTCTGTATAC GATGCATTTG CTTACACTCT GACCGCACTT 
TACTATGAAA ATTTTAAAAA TGCCTATCGT TCTGAACAAG GTTACATTAA AAAAGATGTA 
TTAATTAAGG ATGTGCTTGT TTATCTCAAT AATAATTATC GTGAAAAAAT CACGCTTGAC 
CAGCTATCGA AAAAATTTCG CGCCAGCGTC AGTTATATAT GTCATGAATT TGCCAAAGAA 
TATCATATAT CCCCTATCAA TTATGTTATT CAACGACGTA TGACCGAGGC CAAGTTTGCG 
CTGACAAACA CTGAGTCGCC ACTGGCAGAA ATTTCATGGC GGGTAGGATA TGAAAATGTG 
GACCATTTTG CCAAATTGTT TATGCGGCAT GTAGGATGTT CTCCCAACGA TTATCGTAAG 
CAATTTAAAA ATAGTCTGGT TGAGCAGGCG TATTTGCTGC CAAATACCTG A
 
Protein sequence
MYQRCFDSAA ETIFEQDKTP RFSRFVISDD PNWESGHHMH DNETELIYVK KGIARLIIDS 
SLYVAHADDI VVVERGRLHA VASDSNSPAT TYTCALYGFC FPGWEENQLL QSHSCPVVSV 
VQGKEVIKSI FNELSVLLPQ GKNVLASSVY DAFAYTLTAL YYENFKNAYR SEQGYIKKDV 
LIKDVLVYLN NNYREKITLD QLSKKFRASV SYICHEFAKE YHISPINYVI QRRMTEAKFA 
LTNTESPLAE ISWRVGYENV DHFAKLFMRH VGCSPNDYRK QFKNSLVEQA YLLPNT