Gene SeSA_A1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1417 
Symbol 
ID6517390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1366600 
End bp1367991 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content55% 
IMG OID642746535 
Productsodium:dicarboxylate symporter family 
Protein accessionYP_002114340 
Protein GI194736967 
COG category[R] General function prediction only 
COG ID[COG1823] Predicted Na+/dicarboxylate symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.977711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0168529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC CATTAATTGC GAACATTGCG GTGTTCGTCA TTCTGCTGTT TGTACTGGCG 
CAGGCCCGTC ATAAACAGTG GAGTCTGGCT AAAAAAGTGC TTGTCGGCCT TGTGATGGGC 
GTGGTCTTTG GTCTGGCCCT GCACACCATT TATGGCGCTG ACAGTCAGGT GTTAAAAGAC 
TCCATTCAGT GGTTCAATAT TGTCGGCAAC GGCTATGTGC AATTGCTACA AATGATTGTG 
ATGCCGCTGG TATTCGCCTC TATTTTAAGC GCCGTGGCAC GACTGCATAA CGCCTCTCAA 
TTGGGGAAAA TCAGTTTTCT GACTATCGGC ACGCTGCTGT TTACTACCCT TATCGCAGCG 
CTGGTAGGCG TGCTGGTTAC CAATCTGTTC GGACTGACGG CGGAAGGTCT GGTTCAGGGC 
GGCGCGGAAA CCGTGCGTCT GAATGCCATT GAGACGAGCT ATGTCGGCAA AGTGGCCGAT 
CTCAGCGTGC CGCAACTGGT GCTGTCTTTT GTACCGAAAA ATCCGTTTGC GGATCTGACT 
GGTGCAAATC CTACGTCTAT TATCAGCGTG GTGATTTTCG CCGCCTTCCT GGGCGTGGCC 
GCGCTTAAAC TGCTGAAAGA TGATGCGCCA AAAGGCGAGC GTGTGCTTGT TGCTATCGAT 
ACCCTGCAAA GCTGGGTGAT GAAGCTGGTG CGTCTGGTGA TGCAACTTAC GCCTTACGGC 
GTACTGGCGC TGATGACGAA AGTAGTTGCC GGCTCCAATC TGCAGGACAT TATTAAGCTT 
GGAAGCTTCG TGGTAGCGTC ATATCTTGGT CTGGCGATAA TGTTTGTGGT TCACGGCATA 
CTATTGGGCG TGAACGGGAT TAGCCCGCTG AAATATTTCC GCAAGGTGTG GCCGGTGCTG 
ACATTTGCCT TTACCAGCCG CTCCAGCGCC GCCTCCATTC CACTCAATGT CGAAGCGCAA 
ACCCGCCGCC TGGGCGTGCC GGAGTCCATC GCCAGCTTTG CTGCCTCTTT TGGCGCGACC 
ATCGGCCAAA ACGGTTGTGC CGGTCTTTAT CCTGCGATGT TGGCGGTAAT GGTTGCGCCG 
ACGGTCGGCA TCAACCCCTT AGACCCCGTA TGGATAGCCA CGCTGGTGGG TATCGTTACC 
GTAAGTTCGG CGGGTGTTGC CGGCGTTGGC GGCGGCGCGA CCTTCGCCGC GCTGATTGTG 
CTGCCTGCCA TGGGCTTACC GGTCACGCTG GTCGCGCTGT TAATCTCCGT CGAACCGTTG 
ATTGATATGG GCCGTACCGC ACTGAACGTG AGCGGCTCAA TGACCGCGGG TACGCTGACC 
AGCCAGTGGC TGAAGCAGAC CGATAAAACC ATTCTCGATA GCGAAGAAGA CGCTGAACTG 
GCGCATCGAT AA
 
Protein sequence
MNFPLIANIA VFVILLFVLA QARHKQWSLA KKVLVGLVMG VVFGLALHTI YGADSQVLKD 
SIQWFNIVGN GYVQLLQMIV MPLVFASILS AVARLHNASQ LGKISFLTIG TLLFTTLIAA 
LVGVLVTNLF GLTAEGLVQG GAETVRLNAI ETSYVGKVAD LSVPQLVLSF VPKNPFADLT 
GANPTSIISV VIFAAFLGVA ALKLLKDDAP KGERVLVAID TLQSWVMKLV RLVMQLTPYG 
VLALMTKVVA GSNLQDIIKL GSFVVASYLG LAIMFVVHGI LLGVNGISPL KYFRKVWPVL 
TFAFTSRSSA ASIPLNVEAQ TRRLGVPESI ASFAASFGAT IGQNGCAGLY PAMLAVMVAP 
TVGINPLDPV WIATLVGIVT VSSAGVAGVG GGATFAALIV LPAMGLPVTL VALLISVEPL 
IDMGRTALNV SGSMTAGTLT SQWLKQTDKT ILDSEEDAEL AHR