Gene SeSA_A1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1412 
Symbol 
ID6519150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1360649 
End bp1361491 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content43% 
IMG OID642746530 
ProductDNA-binding transcriptional regulator ChbR 
Protein accessionYP_002114335 
Protein GI194735027 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.212987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.035912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGC TACAGGTTAA CGCAACGGAA ATCAAAACGG TTTATGAGCA GCAGCTCTTC 
AATGGCAAAA ATTTCCATGT GTTTATCTAT AACAAGACGG AAAGCGTCAC CGGGCTGCAT 
CAGCACGACT ACTATGAATT TACCCTGGTA TTAACCGGAC GTTATTACCA GGAGATCAAC 
GGGAAGCGTG TGCTGCTGGA ACGTGGAGAT TTTGTTTTTA TCCCGGTGGG GTCGAATCAC 
CAAAGTTTCT ATGAGTTTGG CGCAACGCGT ATTCTGAACG TAGGAATTAG TAAACGTTTT 
TTTGAACAGC ATTATCTTCC GTTACTGCCG TTTTGTTTTG TGGCATCGCA GGTATACAGG 
GCGAATAGCA CCTTCCTTAC CTATATTGAA ACGGTGATTG CGTCGTTGAA TTTTCGCGGC 
AATGGGCTCG ACGAATTTAT CGAAGTGGTG ACATTTTATA TTATAAACCG CTTACGTCAT 
TACCGCGAAG AGCAGGTTTA TGATGATATT CCACAATGGC TGAAAGCAAC CGTGGAGATA 
ATGCATGATA AAACGCAGTT TGGCGAACAT GCGCTGGAAA ATATGGTGCG CCTGTCGGCA 
AAATCCCAGG AGTATCTGAC GCGCGCCACC CGACGTTATT ACAGCAAAAC GCCGATGCAA 
ATCATTAATG AGATTCGCAT TAATTTTGCC AAGAAACAGT TGGAAATGAC CAACTATTCG 
GTTACGGATA TTGCTTATGA AGCCGGGTAT AGCAGTCCAA GTCTGTTTAT TAAAACGTTT 
AAGAAGATGA CCTCATTCAC ACCGAATAGT TATCGGAAGC GATTGACGGA AATTAATGAG 
TAA
 
Protein sequence
MMQLQVNATE IKTVYEQQLF NGKNFHVFIY NKTESVTGLH QHDYYEFTLV LTGRYYQEIN 
GKRVLLERGD FVFIPVGSNH QSFYEFGATR ILNVGISKRF FEQHYLPLLP FCFVASQVYR 
ANSTFLTYIE TVIASLNFRG NGLDEFIEVV TFYIINRLRH YREEQVYDDI PQWLKATVEI 
MHDKTQFGEH ALENMVRLSA KSQEYLTRAT RRYYSKTPMQ IINEIRINFA KKQLEMTNYS 
VTDIAYEAGY SSPSLFIKTF KKMTSFTPNS YRKRLTEINE