Gene SeSA_A1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1398 
Symbol 
ID6515933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1348866 
End bp1350092 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content56% 
IMG OID642746516 
Productbifunctional succinylornithine transaminase/acetylornithine transaminase 
Protein accessionYP_002114321 
Protein GI194735228 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.126602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGT CAGTTACGCG CGAAAACTTT GATGAATGGA TGGTGCCGGT ATATGTTCCC 
GCGCCTTTTA TTCCTGTACG CGGAGAAGGC TCACGCCTGT GGGATCAGCA GGAGAAAGAG
TACATTGATT TTGCTGGCGG GATCGCGGTC AACGCATTGG GACATGCGCA TCCGGCGCTG
CGCGAGGCGT TAAATGAACA GGCGAATCGC TTCTGGCATA CCGGGAACGG TTACACCAAT
GAGCCGGCGC TGCGACTGGC GAAAAAACTG ATCGACGCGA CCTTCGCCGA ACGCGTTTTC
TTTTGTAATT CAGGCGCTGA AGCAAATGAA GCAGCATTAA AACTGGCGCG CAAATATGCC
CACGATCGTG CCGGCAACCA TAAAAGCGGC ATTGTGGCCT TTAAAAACGC GTTCCATGGT
CGCACGCTCT TTACCGTCAG CGCTGGCGGT CAACCCTCCT ATTCACAGGA CTTTGCGCCG
CTGCCGCCGG ATATTCGTCA TGCAGCCTAT AACGATCTGA ACTCCGCCAG CGCGCTAATT
GATGACAATA CCTGCGCCGT GATCGTAGAG CCTGTGCAGG GCGAGGGCGG CGTGATCCCC
GCCACGAAAG CTTTTTTGCA GGGGCTGCGT GAATTGTGCG ACCGGCATCA GGCGTTACTG
ATTTTTGATG AGGTGCAGAC GGGCGTCGGA CGTACCGGCG AACTGTATGC ATATATGCAT
TATGGCGTTA CGCCCGATAT CCTGACGACC GCTAAAGCGT TGGGTGGCGG CTTCCCGATC
GGCGCGATGC TGACCACGCA AGACTATGCC AGCGTTATGA CGCCAGGCAC GCATGGCACC
ACCTACGGCG GTAATCCGCT GGCGACGGCA GTTGCCGGAA AAGTACTGGA TATCATCAAT
ACGCCGGAGA TGCAAAACGG CGTCAGACAG CGCCACGATG CGTTTATTGA ACGTCTAAAT
ACCATTAATG TACGTTTTGG CATGTTCAGT GAAATTCGCG GGCTGGGGCT ACTGCTTGGC
TGTGTGCTAC AGACGGAGTT TGCCGGAAAA GCCAAACTCA TCGCCCAGGA AGCGGCAAAA
GCAGGTGTGA TGGTGCTCAT CGCCGGCGGC GACGTGGTGC GTTTTGCGCC AGCGTTAAAT
GTGAGCGACG AGGAGATAGC CACCGGGCTT GATCGTTTTG CCCTGGCGTG CGAACGCCTT
CAGACGGGAG GCGCACCATG CGGGTGA
 
Protein sequence
MSLSVTRENF DEWMVPVYVP APFIPVRGEG SRLWDQQEKE YIDFAGGIAV NALGHAHPAL 
REALNEQANR FWHTGNGYTN EPALRLAKKL IDATFAERVF FCNSGAEANE AALKLARKYA
HDRAGNHKSG IVAFKNAFHG RTLFTVSAGG QPSYSQDFAP LPPDIRHAAY NDLNSASALI
DDNTCAVIVE PVQGEGGVIP ATKAFLQGLR ELCDRHQALL IFDEVQTGVG RTGELYAYMH
YGVTPDILTT AKALGGGFPI GAMLTTQDYA SVMTPGTHGT TYGGNPLATA VAGKVLDIIN
TPEMQNGVRQ RHDAFIERLN TINVRFGMFS EIRGLGLLLG CVLQTEFAGK AKLIAQEAAK
AGVMVLIAGG DVVRFAPALN VSDEEIATGL DRFALACERL QTGGAPCG