Gene SeSA_A1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1389 
SymbolsppA 
ID6518541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1339582 
End bp1341438 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content56% 
IMG OID642746507 
Productprotease 4 
Protein accessionYP_002114312 
Protein GI194736488 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.146845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.468871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACCC TGTGGCGATT TATTGCCGGA TTTTTTAAAT GGACGTGGCG AGTGTTGAAC 
TTCGTCCGTG AAATGGTACT CAACCTGTTC TTTATTTTTC TGGTCCTGGT GGGCGTTGGG
ATCTGGATGC AGATCGGTAA CGGCAGCAAC AGTGAGCAAA CCGCGCGCGG CGCTCTGCTG
CTGGATATTT CCGGCGTCAT TGTGGATAAA CCGTCCACCA ATCACCGTCT GGGCGCGCTG
GGTCGCCAGT TATTTGGCGC CAGCTCCGAC CGTCTGCAGG AAAACTCCCT GTTTGACATC
GTCAACGCTA TTCGTCAGGC GAAAGATGAC CGTAGCATCA CTGGTATCGT TCTGGATCTG
AAAAACTTCA CCGGCGCCGA TCAGCCGTCA ATGCGCTATA TCGGTAAAGC GCTGCGCGAA
TTCCGCGACA GCGGCAAACC GATTTTTGCC GTGGGTGAAA ACTACAGCCA GGGTCAGTAT
TACCTCGCCA GTTTCGCCAA TAAAATTTGG CTTTCCCCAC AGGGTCAGGT AGATCTTCAC
GGCTTCGCTA CGAATGGCCT GTACTACAAA ACGCTGCTGG ATAAGCTGAA AGTCTCTACC
CACGTTTTCC GGGTCGGCAC CTATAAATCC GCCGTCGAGC CGTTTATCCG CGACGATATG
TCGCCCGCCG CCCGCGAGGC CGACAGCCAC TGGATAGGCG AACTGTGGCA GAACTACCTG
CATACCGTTT CCGCCAATCG CCAGATTTCG CCGCAACAAC TCTTCCCCGG CGCGCAGGCT
ATTATCGACG GGTTAACCAG CGTGGGCGGC GACACCGCCA AATATGCGCT CGACCATAAA
CTGGTGGACG CCCTCGCCTC CAGCGCAGAT GTTGAAAAAG CGCTGACGAA GCAGTTTGGC
TGGAGCAAAA CTGAAAATAA CTATCGCGCG ATCAGCTATT ACGATTATTC GCTGAAAACG
CCTGCGGATA CCGGCGGTAC TATTGCGGTT ATTTTCGCCA ATGGCGCGAT TATGGATGGC
GAAGAAACGC CAGGGAATGT CGGCGGCGAC ACTACGGCAT CGCAGATCCG CGACGCACGC
CTTGATCCTA AAGTGAAAGC GATTGTGCTG CGCGTCAATA GCCCAGGCGG GAGCGTCAAC
GCCTCCGAAG TTATCCGCGC CGAACTGGCG GCGGCAAAAG CGGCCGGCAA ACCGGTGGTG
GTCTCAATGG GCGGCATGGC GGCCTCCGGC GGTTACTGGA TCTCTACGCC GGCAAACTAT
ATCGTGGCCA GCCCCAGCAC GCTGACGGGT TCAATTGGCA TCTTCGGCGT CATCAATACG
GTAGAAAACA GCCTGTCGTC GATTGGCGTA CACAGCGACG GCGTTTCCAC CTCGCCGCTG
GCGGATATTT CGATGACCAA AGCGCTGTCA CCGGAAGTGC AGCAGATGAT GCAACTCAGT
ATTGAGTACG GCTACAAACG CTTTATCACG CTGGTGGCAG ACGCGCGTAA GCGTACGCCG
GAGCAGATTG ATAAAATCGC ACAAGGCCAT GTCTGGACCG GAGAAGACGC GAAAGCCAAT
GGTCTGGTGG ACAGTCTCGG CGACTTTGAC GACGCCGTCG CCAAAGCGGC GGAGCTGGCG
AAACTGAAAC AGTGGCATCT TGATTACTAT CAGGACGAAC CGACGGTCCT TGATATGGTC
ATGGACAGTA TGACCGGATC AGTACGCGCC ATGCTGCCGG AGGCCATTCA GGCGATGCTC
CCGGCGCCGC TCGTTTCCGC CGCCAACACG GTGAAGGCCG AGGGGGATAA ACTGGCGGCA
TTTAACGATC CGCAAAACCG TTATGCGTTC TGTTTGACTT GCGCGAACGT TCGCTAA
 
Protein sequence
MRTLWRFIAG FFKWTWRVLN FVREMVLNLF FIFLVLVGVG IWMQIGNGSN SEQTARGALL 
LDISGVIVDK PSTNHRLGAL GRQLFGASSD RLQENSLFDI VNAIRQAKDD RSITGIVLDL
KNFTGADQPS MRYIGKALRE FRDSGKPIFA VGENYSQGQY YLASFANKIW LSPQGQVDLH
GFATNGLYYK TLLDKLKVST HVFRVGTYKS AVEPFIRDDM SPAAREADSH WIGELWQNYL
HTVSANRQIS PQQLFPGAQA IIDGLTSVGG DTAKYALDHK LVDALASSAD VEKALTKQFG
WSKTENNYRA ISYYDYSLKT PADTGGTIAV IFANGAIMDG EETPGNVGGD TTASQIRDAR
LDPKVKAIVL RVNSPGGSVN ASEVIRAELA AAKAAGKPVV VSMGGMAASG GYWISTPANY
IVASPSTLTG SIGIFGVINT VENSLSSIGV HSDGVSTSPL ADISMTKALS PEVQQMMQLS
IEYGYKRFIT LVADARKRTP EQIDKIAQGH VWTGEDAKAN GLVDSLGDFD DAVAKAAELA
KLKQWHLDYY QDEPTVLDMV MDSMTGSVRA MLPEAIQAML PAPLVSAANT VKAEGDKLAA
FNDPQNRYAF CLTCANVR