Gene SeSA_A1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1386 
Symbol 
ID6515487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1337158 
End bp1337436 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content49% 
IMG OID642746504 
Productgeneral negative regulator of transcription subunit 1 
Protein accessionYP_002114309 
Protein GI194738192 
COG category[S] Function unknown 
COG ID[COG3139] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.192473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.463318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTG ATGAGATCAT TAACAGCATG ACGCCGGAAG TGTATCAACG TTTATCCACC 
GCCGTTGAGC TGGGTAAATG GCCGGATGGC GTGGCGTTGA CGCCGGAACA GAAAGAAAAC 
AGCCTACAGC TGGTGATGCT ATGGCAGGCG CGGCACAATA CCGAAGCGCA ACATATGACG 
ATCGATACTC ACGGTCAGAT GGTGATGAAA AGCAAGCAGC AGCTCAAAGC GGATTTCGGT 
ATTACGTCAA AGCCGATTGC GACATTGAAA ATGCAGTAA
 
Protein sequence
MNLDEIINSM TPEVYQRLST AVELGKWPDG VALTPEQKEN SLQLVMLWQA RHNTEAQHMT 
IDTHGQMVMK SKQQLKADFG ITSKPIATLK MQ