Gene SeSA_A1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1356 
Symbol 
ID6519225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1314856 
End bp1315704 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content46% 
IMG OID642746476 
Productputative transcriptional regulator 
Protein accessionYP_002114281 
Protein GI194737264 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000135283 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.653551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTT TTAGTATTAG CGCAATGGCG GCGCAGTGTG GTGTCACAAC AGCAAATATC 
AGGTCCTGGG AACGCTATGG CCTGCTTCAA CCTACCAAAG ATGAAGTTGG CAATCGTTTT 
TATTGCATAG AAGATGCTAT CAGAATACAG CATATTATCG ACGCGTTAAG CAAAGGCTTC 
TCATTAAAAG AGATTAAACC TGCCCTCTAT GGTGAAGAAA CGCATTGCCG CTCGGGATGG 
TTATTCTACC AGGAAGAGAT TTTAGCGCAG TGTAGAAAAT TCGAACCCGC CAAATTGCGA 
AAATTACTCT GGCGTTATGG TCGGGAAATT CCGCCGTGTA TCGTAATTGA GTCAATACTG 
CGTCCTTTAC GGCTGTGGTT GTCCGCAGGC GATGATGATG CACGCCGATT TGAAAAGGCA 
TTACTGGATA CTGCGATTAT TGAATACGCC ACGTTCCAGC TAAGTAGCGT ACGAAAGGCG 
CCAGCAGGCA CAATGCTTAT TGCTGCGTTT TCGCTGAACG ACCCCATTGA GCTATGGCTG 
GAAACGATTA AATATTGTAG TGAAGGTATG CGAGTTGAAG TCATCCCCTG GCAGGCGCCG 
ATGCCCGATC TTTTATCAAC GTCTTTCGAG CATATTGTTC TGTGGCATGA TGAGACATTA 
ACTCCCGCCC AGGAAAATCT TATTCAGGCG TTAAAAGAAT CGGGTAAATT TAGTCTTCAT 
GTGAAAAATG GCTCAGGCTT AACATTACTG CCAGCCGTAT ACCGGCAGCA TGAGATGCCA 
GAAAGCATGC AGCATGTTGC ACCGCAAATC CATGCAAACG GCTACGAAAA ATCAGGCACC 
GCACGTTGA
 
Protein sequence
MATFSISAMA AQCGVTTANI RSWERYGLLQ PTKDEVGNRF YCIEDAIRIQ HIIDALSKGF 
SLKEIKPALY GEETHCRSGW LFYQEEILAQ CRKFEPAKLR KLLWRYGREI PPCIVIESIL 
RPLRLWLSAG DDDARRFEKA LLDTAIIEYA TFQLSSVRKA PAGTMLIAAF SLNDPIELWL 
ETIKYCSEGM RVEVIPWQAP MPDLLSTSFE HIVLWHDETL TPAQENLIQA LKESGKFSLH 
VKNGSGLTLL PAVYRQHEMP ESMQHVAPQI HANGYEKSGT AR