Gene SeSA_A1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1354 
Symbol 
ID6515993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1313180 
End bp1314049 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID642746474 
Productaminoglycoside resistance protein 
Protein accessionYP_002114279 
Protein GI194734256 
COG category[R] General function prediction only 
COG ID[COG1708] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000229675 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.677738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCG AGCTTTTTTT CTGCCGTTAT GCCATATTTC TGGCAATCAA TATAAAAAAT 
ACCTGCGCCC CCGGAGCGAT GATGACGCTG TCCATACCGC CCTCGATTCA ATGCCAAACG 
GAAGCGGCAT GTCGCCTGAT TACTCGTGTC ACAGGCGATA CGTTGCGTGC TATTCATTTA 
TATGGTTCCG CTGTCGCGGG CGGTCTGAAG CCAAACAGCG ACATTGATCT GCTGGTGACA 
ATATGCCAGC CGCTGACGGA GACCCAACGC GCAACGCTGA TGCAGGAATT GCTGGCGCTT 
TCATCGCCGC CGGGGGCGTC GGCAGAAAAA CGCGCTCTGG AGGTCACTGT CGTGCTTTAT 
TCGCAGCTGG TTCCCTGGTG TTTTCCACCT TCCAGGGAAA TGCAATTTGG CGAGTGGCTA 
AGAGAGGACA TTTGTCAGGG GATTTATGAA CCAGCGCAGC AGGACTGGGA CATTGTGTTA 
CTGATAACCC AAATTCTGGA AACCAGTATA CCGCTAAAGG GCGAACGCGC GGAACGGCTG 
TTCACGCCAG CCCCTGCGGC GCAGTTGCTG AAGGCCTTGC GTTATCCCCT CGACCTTTGG 
CAATCCACGG CAGATGTGCA GGGAGATGAG TATCATATCG TTTTAACCCT GGCGCGTATC 
TGGTACACCC TTTCTACCGG GAGATTTACC TCTAAGGATG CGGCGGCTGA CTGGCTGTTA 
CCTCAGTTGC CGGAAGATTA TGCTGCCACG TTGCGTGCGG CGCAGCGTGA ATATTTAGGT 
CTGGAGCAGC AGGACTGGCA TATTTTGCTG CCTGCGGTCG TACGCTTTGT GGATTTTGCG 
AAAACGCACA TCCCCACGCA GTTCACATAA
 
Protein sequence
MNSELFFCRY AIFLAINIKN TCAPGAMMTL SIPPSIQCQT EAACRLITRV TGDTLRAIHL 
YGSAVAGGLK PNSDIDLLVT ICQPLTETQR ATLMQELLAL SSPPGASAEK RALEVTVVLY 
SQLVPWCFPP SREMQFGEWL REDICQGIYE PAQQDWDIVL LITQILETSI PLKGERAERL 
FTPAPAAQLL KALRYPLDLW QSTADVQGDE YHIVLTLARI WYTLSTGRFT SKDAAADWLL 
PQLPEDYAAT LRAAQREYLG LEQQDWHILL PAVVRFVDFA KTHIPTQFT