Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1349 |
Symbol | |
ID | 6519015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1309983 |
End bp | 1310573 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642746469 |
Product | ATP-binding protein of ABC transport system |
Protein accession | YP_002114275 |
Protein GI | 194736579 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000774102 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.444548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAGCT GCCGCGACCT CGTTATTCGT CAGGGTGGGA AAGTCTTATG GCAGAACCTG ACGTTTACGA TTTCTGCCGG TGAACGGGTA GGAATTCATG CGCCAAGCGG AACGGGGAAA ACAACGTTGG GGCGCGTCCT GGCCGGATGG CAAAAACCGA CGGCGGGCGA CGTTCTGCTG GACGGTAGCC CGTTACCCCT GCATCAGTAT TGTCCGGTAC AGCTTGTCCC CCAGCATCCT GAACTGACGT TTAATCCCTG GCGAAGCGCC GGAGACGCTG TGCGTGATGC CTGGCAGCCT GACCCGGAAA CGATGAGGCG TTTGTATGTG CAGCCCGAGT GGCTGACGCG TCGGCCAATG CAGCTCTCTG GCGGGGAGTT GGCGCGAATT GCGATACTGC GCGCGCTTGA CCCGCGAACG CGTTTTCTGA TTGCCGACGA AATGACGGCG CAACTCGATC CGTCTATTCA AAAAGCGATA TGGGTATACG TGCTTGAGGT GTGTCGCAGC CGTTCATTAG GGATGTTGGT GATTAGTCAT CAGTCTGCGC TGCTTGATCA AGTCTGTACC CGCCATTTAC AGGTGGAATA G
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Protein sequence | MLSCRDLVIR QGGKVLWQNL TFTISAGERV GIHAPSGTGK TTLGRVLAGW QKPTAGDVLL DGSPLPLHQY CPVQLVPQHP ELTFNPWRSA GDAVRDAWQP DPETMRRLYV QPEWLTRRPM QLSGGELARI AILRALDPRT RFLIADEMTA QLDPSIQKAI WVYVLEVCRS RSLGMLVISH QSALLDQVCT RHLQVE
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