Gene SeSA_A1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1349 
Symbol 
ID6519015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1309983 
End bp1310573 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID642746469 
ProductATP-binding protein of ABC transport system 
Protein accessionYP_002114275 
Protein GI194736579 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000774102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.444548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGCT GCCGCGACCT CGTTATTCGT CAGGGTGGGA AAGTCTTATG GCAGAACCTG 
ACGTTTACGA TTTCTGCCGG TGAACGGGTA GGAATTCATG CGCCAAGCGG AACGGGGAAA
ACAACGTTGG GGCGCGTCCT GGCCGGATGG CAAAAACCGA CGGCGGGCGA CGTTCTGCTG
GACGGTAGCC CGTTACCCCT GCATCAGTAT TGTCCGGTAC AGCTTGTCCC CCAGCATCCT
GAACTGACGT TTAATCCCTG GCGAAGCGCC GGAGACGCTG TGCGTGATGC CTGGCAGCCT
GACCCGGAAA CGATGAGGCG TTTGTATGTG CAGCCCGAGT GGCTGACGCG TCGGCCAATG
CAGCTCTCTG GCGGGGAGTT GGCGCGAATT GCGATACTGC GCGCGCTTGA CCCGCGAACG
CGTTTTCTGA TTGCCGACGA AATGACGGCG CAACTCGATC CGTCTATTCA AAAAGCGATA
TGGGTATACG TGCTTGAGGT GTGTCGCAGC CGTTCATTAG GGATGTTGGT GATTAGTCAT
CAGTCTGCGC TGCTTGATCA AGTCTGTACC CGCCATTTAC AGGTGGAATA G
 
Protein sequence
MLSCRDLVIR QGGKVLWQNL TFTISAGERV GIHAPSGTGK TTLGRVLAGW QKPTAGDVLL 
DGSPLPLHQY CPVQLVPQHP ELTFNPWRSA GDAVRDAWQP DPETMRRLYV QPEWLTRRPM
QLSGGELARI AILRALDPRT RFLIADEMTA QLDPSIQKAI WVYVLEVCRS RSLGMLVISH
QSALLDQVCT RHLQVE