Gene SeSA_A1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1348 
Symbol 
ID6518218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1309192 
End bp1309989 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content55% 
IMG OID642746468 
Productnickel/di-oligopepetide ABC transporter ATP binding subunit 
Protein accessionYP_002114274 
Protein GI194737552 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0129177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.479872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGTT TTCAACAGGT TACGCTGGAA AACGCGCGTT ATCGCTGGTA TGGCGCGAGA 
CGCTGGTCGC CGTTATTACA GAATGTCTCT TTTGATATCG CGCCCGGAGA AATGGTGGCA
TTGGTTGGCG GCAGCGGGGA GGGCAAAAGT CTGCTGCTGC AATGCCTGCT CGATCTGCTG
CCGGAAAATT TACGCTTTCG GGGGGAAATT ACGCTTGATG GCAACCGGCT GGACAGACAT
ACCATCAGGC AGCTTAGGGG CAATACGTTT AGCTACGTGC CGCAGGGGGT ACAGGCGCTT
AATCCCATGC TGAATATCAG AAAACATTTG AACAGAGCAT GTCATCTGAC CGGACGCGTC
TGGGATGAGA CGCAGATGGT ACAGCTATTG CAGCAAAGCG ATCTCGAACC GACAGTCCTG
GAACGCTTTC CTCGCCAGCT CTCCGGCGGG ATGGCTAAAC GAATTCTGGC GTGCCACGCC
TCGCTCAGCC AGGCACGTTA TATCCTCGCG GATGAGATCA CCGCCTGGCT TGATACCGCA
CTGGCAAACC AGTTGCTTGA GCACTTGCGA GGTCTCTGCG AGCGGGGATG CGGCGTGCTG
TGGGTGACTC ATGACCTGCT GCTGGCGGCG CGGTATGCCG ATCGCATTGT GGCGCTGCAT
CAGGGTTATA TCACGGACAA TATTCGCTGT GAACGATTAC AGCCGGAAGA GATGAGTGAG
CCGTTAAAAC GACAATGGCA AGCATTGCCT GAACTAAACC CGTTATTTAT GCCGACCAGA
GAGGGAATAG AATGCTAA
 
Protein sequence
MLSFQQVTLE NARYRWYGAR RWSPLLQNVS FDIAPGEMVA LVGGSGEGKS LLLQCLLDLL 
PENLRFRGEI TLDGNRLDRH TIRQLRGNTF SYVPQGVQAL NPMLNIRKHL NRACHLTGRV
WDETQMVQLL QQSDLEPTVL ERFPRQLSGG MAKRILACHA SLSQARYILA DEITAWLDTA
LANQLLEHLR GLCERGCGVL WVTHDLLLAA RYADRIVALH QGYITDNIRC ERLQPEEMSE
PLKRQWQALP ELNPLFMPTR EGIEC