| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1346 |
|---|
| Symbol | |
|---|
| ID | 6517515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1307422 |
|---|
| End bp | 1308396 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642746466 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transporter permease component |
|---|
| Protein accession | YP_002114272 |
|---|
| Protein GI | 194736299 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.981924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.347741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGT TCTTCAGCCA TTTTTTGCGG CTGATTATTC TGTTGGTGCT GGTGGCTGCC
GGCACCTTCA TTTTGCTCAG CTTTTCGCCC GTTGATCCTA TCCGTGCTTA TATCGGCAAC
GATCTGCTCC ATGTTCCGCC AGAACAATAT GCGCGGATTG CGGCGCGCTG GGGGCTTGAC
CAGCCGCTGT GGGAGCGTTT CGGTCACTGG TTTTGGCGTC TGCTCCAGGG AGACATGGGG
TATTCCATGC TGTTCAACAT GCCTGTCGCC AGCGTGATCC GGGAACGTTT TGCGACGTCA
TTCGCGCTGC TGGCAGGCGC CTGGCTATTG TCTGGTGTGC TGGGCGTGAC ATTGGGTTTT
CTGGCCGGAC GTTTTCTCCA CCGCTGGCCG GATAAGATGA TTTGCCGTAT CAGCTACTTA
TTGTCATCGT TGCCCACTTT CTGGATAGCA ATGCTGTTGC TGGCGCTGTT TGCCGTCCGC
TGGCCGATAT TACCTGTTTG TTGCGCCTGG GACCCCGGAA ATAATGCAGG AACAGCTCTT
TTATCGGAAC GTTTACGCCA TCTTGTGTTG CCGGTATGTG CGTTAAGTCT GTTGGGCATG
GGGCAAATTG CGCTGCATAC GCGAGAAAAA ATAGCCAGCG TAATGAAGAG CGAATTTATT
CGTTTTGCGC GCGCTCAGGG GGATAAAGGA TGGTCGCTGT TACGTCACCA GGTGTTACGT
CATGCGATTA CCCCAGCGCT CTGCTTACAG TTTGCTTCTC TGGGCGAACT GATGGGGGGG
GCGTTACTGG CAGAAAAAGT CTTTGCGTAT CCGGGGCTGG GACAGGCCAC TATCGATGCC
GGCCTGCGTG GCGATGTCCC GCTACTCATG GGGATCGTTT TATTCTGTAC GCTATTAGTG
TTTGCCGGAA ATACGATTTC AGCCTGGCTT GTGGTGGTGC TTAATCGATC GCTGGAGCGT
CCCGATGCTC TATAA
|
|---|
| Protein sequence | MKLFFSHFLR LIILLVLVAA GTFILLSFSP VDPIRAYIGN DLLHVPPEQY ARIAARWGLD
QPLWERFGHW FWRLLQGDMG YSMLFNMPVA SVIRERFATS FALLAGAWLL SGVLGVTLGF
LAGRFLHRWP DKMICRISYL LSSLPTFWIA MLLLALFAVR WPILPVCCAW DPGNNAGTAL
LSERLRHLVL PVCALSLLGM GQIALHTREK IASVMKSEFI RFARAQGDKG WSLLRHQVLR
HAITPALCLQ FASLGELMGG ALLAEKVFAY PGLGQATIDA GLRGDVPLLM GIVLFCTLLV
FAGNTISAWL VVVLNRSLER PDAL
|
|---|
| |