Gene SeSA_A1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1340 
Symbol 
ID6517899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1302987 
End bp1304030 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content51% 
IMG OID642746460 
Productputative cytoplasmic protein 
Protein accessionYP_002114266 
Protein GI194736503 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4692] Predicted neuraminidase (sialidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.153382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAG CGCTCGTCAA TCGGCAGGTC ATTTTACCGG AAAGCGGAAC CGAGTTCTTC 
CAGTGCCATG CCTCTACGCT TGTTCGCTTA CCGTGCGGTA CGCTCGTGGC CGCATGGTTC 
GCGGGGTTGC GCGAAGGAAG CGAAGATACA GCCATCTGGC TATCTCGCTA TGAACATAAT 
ATCTGGACAA CACCGCAGCG AGTGGCGGCA CGCGAGGGGG AAGCGCACTG GAATCCGGTG 
TTATTTTACC CGTCGGATAA ATTGTGGTTA TTTTATAAAG TAGGCAGCGA CGTACACGTG 
TGGAAAACCT GGTTTATCAC CTCCAGCGAT CGAGGATTTA CCTGGAGTAC GCCAGCTCCG 
TTGGTCAACG ATGATATTTT GCCGCGCGGT CCCGTGAAAA ATAAACTCCT GCTGGCATCA 
AATGGTGCCT GGATTGCGCC AGGGTCGATT GAAAGTCCTG AACGGTGGAG GGCATTTGTG 
GATCGATCCT CTGACGAAGG AAAACACTGG AATATCTCTT TTGTTCCACT GGAGGCTGAT 
AACGCTATTC CCGGGACAAA CGTAGCGTTG TGGGATGGTG TAAAAAAGGG GATGTTGTGG 
GAATGTTGTC TGGAAAACCT CCTGCGCTGG GATGGCGTTA TTCAGCCTAC GCTGTGGGAG 
TCTTCTCCGG GGCATATCCA TATGTTGTTA CGAAGCACAC GCGGGGCAAT TTTTCGCAGT 
GATTCAATCG ACTATGGCGC TACCTGGTCT GTTGCCCGCG CGACATCTTT ACCGAATAAT 
AATAGTGGTA TCGATCTGGT TAGTATGCCG GACGGTACGC TGATTCTTGC GTTAAATCCG 
GTCAACGGCA ACTGGGGAAA GCGCTATCCG CTTTCACTGA TTGCTTCCCA GGATAATGGC 
GAATCATGGC TACCGCTACT GGACCTGGAA AGTGACCACG GTGAGTATTC TTATCCCGCT 
ATTATTAGCG AGGGCGGCGT CGTACATATC ACCTACACAT GGAACCGGAA AAATATCGTA 
TATTGTCGAT TACAAACGGT GTAA
 
Protein sequence
MKLALVNRQV ILPESGTEFF QCHASTLVRL PCGTLVAAWF AGLREGSEDT AIWLSRYEHN 
IWTTPQRVAA REGEAHWNPV LFYPSDKLWL FYKVGSDVHV WKTWFITSSD RGFTWSTPAP 
LVNDDILPRG PVKNKLLLAS NGAWIAPGSI ESPERWRAFV DRSSDEGKHW NISFVPLEAD 
NAIPGTNVAL WDGVKKGMLW ECCLENLLRW DGVIQPTLWE SSPGHIHMLL RSTRGAIFRS 
DSIDYGATWS VARATSLPNN NSGIDLVSMP DGTLILALNP VNGNWGKRYP LSLIASQDNG 
ESWLPLLDLE SDHGEYSYPA IISEGGVVHI TYTWNRKNIV YCRLQTV