Gene SeSA_A1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1325 
Symbol 
ID6518807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1294439 
End bp1295248 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content46% 
IMG OID642746445 
Productcytolethal distending toxin B 
Protein accessionYP_002114253 
Protein GI194734538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.384287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC CTGTTTTTTT CCTTCTGACC ATGATCATCT GCAGCTATAT TTCTTTTGCC 
TGCGCTAATA TCAGTGACTA CAAAGTTATG ACCTGGAATC TTCAGGGCTC TTCAGCATCT 
ACAGAAAGTA AATGGAATGT CAATGTCAGA CAGCTTTTAA GTGGTACTGC CGGTGTGGAT 
ATTCTTATGG TACAGGAGGC CGGTGCTGTT CCCACCTCAG CGGTTCCTAC CGGACGACAT 
ATTCAGCCTT TTGGAGTGGG TATTCCCATT GATGAATACA CCTGGAATCT CGGAACCACC 
AGCCGTCAGG ATATAAGATA TATCTACCAC TCGGCTATTG ATGTTGGAGC GCGCCGTGTT 
AATCTGGCAA TAGTTTCCAG ACAAAGAGCG GATAATGTTT ATGTCTTGCG TCCGACAACT 
GTCGCATCTC GCCCCGTCAT TGGCATCGGA CTGGGTAATG ATGTTTTTCT GACAGCGCAC 
GCACTGGCTA GTGGAGGTCC GGATGCTGCA GCTATTGTCA GGGTTACCAT TAATTTTTTT 
AGACAACCTC AGATGCGGCA TTTATCCTGG TTTCTTGCCG GGGATTTTAA TCGCAGCCCA 
GACAGACTTG AAAATGACCT GATGACTGAG CATCTGGAAC GAGTTGTAGC CGTACTCGCA 
CCTACAGAAC CCACGCAAAT TGGCGGTGGT ATTTTAGATT ATGGGGTCAT TGTCGATCGA 
GCACCTTATT CACAAAGGGT TGAAGCATTA CGTAATCCAC AACTCGCTTC TGATCATTAT 
CCCGTAGCCT TTTTGGCACG AAGCTGTTAA
 
Protein sequence
MKKPVFFLLT MIICSYISFA CANISDYKVM TWNLQGSSAS TESKWNVNVR QLLSGTAGVD 
ILMVQEAGAV PTSAVPTGRH IQPFGVGIPI DEYTWNLGTT SRQDIRYIYH SAIDVGARRV 
NLAIVSRQRA DNVYVLRPTT VASRPVIGIG LGNDVFLTAH ALASGGPDAA AIVRVTINFF 
RQPQMRHLSW FLAGDFNRSP DRLENDLMTE HLERVVAVLA PTEPTQIGGG ILDYGVIVDR 
APYSQRVEAL RNPQLASDHY PVAFLARSC