Gene SeSA_A1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1323 
Symbol 
ID6517781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1293299 
End bp1293841 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID642746443 
Producthypothetical protein 
Protein accessionYP_002114251 
Protein GI194738150 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.337716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAG ATGAAATCTT TGCAGCTATC CTTAGTAGAG AAGGTGGTTA CGTTGATCAC 
CCTGACGACA GGGGGGGACC AACGCATTGG GGTATAACCC TGACGACGGC CCGGGCTAAT 
GGCTATATGG GGGATATGCG GAATCTTACC CGTAATCAAG CATTAAAAAT CCTTGAGGCA 
GATTATTGGT ATGGTCCACG ACTTGATCAG GTTGCCATTA TCTCTCACTC TATCGCAGCT 
GAGCTTTGTG ATACTGGTGT GAACATGGGA CCCTCAATCC CGATTAAGTA CTTCCAGCGT 
TGGCTTAATG TTTTTAATGA TCAGCAAAAA ATTTATCCGG ATTTGATAGC AGATGGTCAG 
ATTGGGCCAC GGACGCTTTC GGCACTAACA TTTTTTCTCT CTCACCGGAG AGATGAGGGC 
GAAATGATAC TTATCCGTGC ATTGAATTGT AGTCAGGGAC AACGCTATCT GGAGTTAGCT 
GAAAAGCGCC AGGCGAATGA GTCATTTGTT TATGGATGGA TAAAGGAACG GGTAAGGTTG 
TAA
 
Protein sequence
MTKDEIFAAI LSREGGYVDH PDDRGGPTHW GITLTTARAN GYMGDMRNLT RNQALKILEA 
DYWYGPRLDQ VAIISHSIAA ELCDTGVNMG PSIPIKYFQR WLNVFNDQQK IYPDLIADGQ 
IGPRTLSALT FFLSHRRDEG EMILIRALNC SQGQRYLELA EKRQANESFV YGWIKERVRL