Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1295 |
Symbol | lolD |
ID | 6515898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1268516 |
End bp | 1269217 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746416 |
Product | lipoprotein transporter ATP-binding subunit |
Protein accession | YP_002114224 |
Protein GI | 194735840 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0289168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA TCCTGTTGCA ATGCGACAAC CTGTGCAAAC GCTATCAGGA AGGCACCGTA CAAACCGACG TGTTGCACGA TGTCAGCTTC AGTATCGGCG AAGGCGAAAT GATGGCGATC GTCGGCAGTT CCGGTTCGGG TAAAAGTACG TTGCTGCATC TGTTAGGCGG GCTGGATACG CCTACCTCTG GCGATGTGAT TTTTAGCGGC CAGCCGATGA GCAAACTCTC TTCTGCGGCA AAAGCGGAAT TACGTAACCA GAAACTGGGG TTTATCTATC AGTTTCATCA TCTCCTGCCG GATTTTACGG CGCTGGAAAA CGTGGCGATG CCATTATTAA TTGGCAAAAA GAAACCGGCG GAGATTGACG CTCGGGCGCG AGAAATGCTG CACGCCGTAG GGCTGGAGCA TCGCGCAACC CATCGACCTT CGGAACTTTC CGGCGGTGAG CGCCAGCGTG TCGCGATAGC GCGCGCGTTG GTGAATAACC CGCGTCTGGT ACTGGCGGAT GAGCCGACCG GTAATCTGGA TGCGCGTAAT GCCGACAGTA TTTTTGAGCT TCTGGGCGAG TTAAATCGTC TGCAGGGAAC CGCGTTTCTG GTGGTGACTC ACGATTTGCA ACTGGCGAAA CGTATGAGCC GCCAGCTTGA GATGCGCGAT GGTCGCCTGA CGGCGGAACT GAGCCTGATG GGGGCTGAGT AA
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Protein sequence | MNKILLQCDN LCKRYQEGTV QTDVLHDVSF SIGEGEMMAI VGSSGSGKST LLHLLGGLDT PTSGDVIFSG QPMSKLSSAA KAELRNQKLG FIYQFHHLLP DFTALENVAM PLLIGKKKPA EIDARAREML HAVGLEHRAT HRPSELSGGE RQRVAIARAL VNNPRLVLAD EPTGNLDARN ADSIFELLGE LNRLQGTAFL VVTHDLQLAK RMSRQLEMRD GRLTAELSLM GAE
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