Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1280 |
Symbol | |
ID | 6516628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1252534 |
End bp | 1254708 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642746401 |
Product | ferric-rhodotorulic acid outer membrane transporter |
Protein accession | YP_002114209 |
Protein GI | 194735888 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.147358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.76264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCA TTCAATACCG CCGGGACAAA CACCTTCAGT CCACCGCCGC ACCGTCGCTG TTAGCTATGG GTATGGCGAT GGCATTTATG CCTGCCGCCT TCGCGGCTGA GGATACCGTT ATTGTCGAGG GCGCGACGAC CGCTGACGCC GTAAACCGCG AAGAACAGGA TTACAGCGTG AAAACGACCG CTGCGGGCAC CAAAATGACG ATGACTCAGC GCGATATCCC GCAGTCGGTC AGTATTGTCA GCCAACAGCG TATGGAAGAC CAGCAGTTGC AAACCCTGGG CGAGGTGATG ACCAATACGC TGGGGATCAG CGGAAGCCAG GCTGACTCCG ATCGCATCAG CTATTACTCG CGCGGGTTTG AAATTGACAA CTATATGGTT GACGGTATTC CAACGTATTT TGAGTCCCGC TGGAATCTGG GCGATGCGCT AACGGATACC GCGCTGTATG AGCGCGTGGA GGTGGTTCGC GGCGCGAATG GGCTGATGAC CGGAACCGGT AATCCTTCTG CCTCAATAAA TATGATTCGT AAACACGCCA CCAGTCGGGA GTTCAAAGGT AACGTCTCCA CAGAATACGG TAGCTGGAAT AAGCAGCGTT ACGTCATGGA TCTGCAAAGT CCGCTCACCG CAGACGGCAA TGTCCGTGGG CGCATCGTGG CGGGTTATCA GAATAATGAT TCCTGGCTGG ACCGCTATAA CAGTGAGAAA GCGTTCTTTT CCGGAATTGT CGATGCCGAT CTGGGTGCAA CCACTGGCCT TTCAGCCGGT TATGAATATC AAAAAATTGA TGTCAATAGC CCGACCTGGG GCGGTCTGCC GCGCTGGAAC ACCGATGGCA GCAAAAATAG CTATGACCGC GCGCGTAGTA CCGCCCCGGA CTGGGCTTAT AACAACAAAG AGATAAATAA ATTCTTCGTC ACGCTTAAGC AGCGTTTTGC CGAAAGCTGG CAGGCGACCC TGAATGCGAC CCATACTGAG GTCAAATTCG ACAGTAAAAT GATGTATATC GATGCGTTAG TCGATAAAGA GACAGGTACG CTAGTGAGTC CTTATGGCGC AAGCTACCCC GTGGTCGGCG GTACGGGCTG GAACAGCGGC AAGCGCAAAG TAGATGCCAT AGATCTCTTT GCCGATGGCG CTTATGAGCT GTTTGGCCGT CAGCACAATA TGATGTTTGG CGGCAGTTAT AGTAAGCAGA ATAACCGCTA TTTTAGCGCC TGGGCGAACG TCTTTCCGGA CGACATTGGC AACTTCAGCG CCTTTAACGG TAATTTCCCC CAAACCCACT GGGCGCCACA AAATCTGGCG CAGGACGATA CCACGCATAT GAAATCGCTG TATGCCGCTA CGCGCATTTC GCTGGCTGAT CCGCTGCATC TGATTCTTGG CGCTCGTTAT ACCAACTGGC GTGTTGATAC ACTGACCTAC AGCATGGAGA AAAACCATAC CACGCCGTAT GCCGGGCTGA TTTATGATAT CAACGACAAC TGGTCCGCTT ATGCCAGTTA TACCTCTATC TTTCAGCCGC AGAATAAACG TGACAAAGCA GGTCAATATC TGGCTCCGAT TACCGGTAAT AACTATGAAG CGGGCCTGAA GTCCGACTGG ATGAACAGCC GCCTCACCAC CACGTTGTCC GTGTTCCGCA TTGAGCAGAA TAACGTCGCT CAGGCAACCA CTATTCCTAT CCCTGGCAGT AATGGGGAGT TTGCCTGGAA GTCTACTGAC GGAACGGTGA GCAAAGGCGT CGAATTTGAA GTGAACGGCG CAATTACCGA TAACTGGCAG ATGACTTTCG GGGCTACCCG GTATGTTGCC GAGGACAATG AAGGTAACGC CGTGAACCCT AATCTCCCGC GCACCAGCGT GAAGTTATTC ACCCGCTATC GTCTGCCGGC GATGCCGGAG CTGACGGTCG GCGGCGGCGT GAACTGGCAG AATCGGGTTT ACAAAGATAC CACGACGCCG TACGGCACTT TCCGCGCCGA ACAGGGCAGC TATGCGCTGG TCGATCTGTT TACCCGCTAT CAGGTGACGA AAAATTTCTC CGTACAGGGA AACATCAACA ACCTGTTCGA TAAAACCTAC GACACCAATA TTGATGGTTC CATTGTTTAC GGCGCGCCGC GTAACGTCAG CCTCACCGCC AATTATCAGT TCTGA
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Protein sequence | MSFIQYRRDK HLQSTAAPSL LAMGMAMAFM PAAFAAEDTV IVEGATTADA VNREEQDYSV KTTAAGTKMT MTQRDIPQSV SIVSQQRMED QQLQTLGEVM TNTLGISGSQ ADSDRISYYS RGFEIDNYMV DGIPTYFESR WNLGDALTDT ALYERVEVVR GANGLMTGTG NPSASINMIR KHATSREFKG NVSTEYGSWN KQRYVMDLQS PLTADGNVRG RIVAGYQNND SWLDRYNSEK AFFSGIVDAD LGATTGLSAG YEYQKIDVNS PTWGGLPRWN TDGSKNSYDR ARSTAPDWAY NNKEINKFFV TLKQRFAESW QATLNATHTE VKFDSKMMYI DALVDKETGT LVSPYGASYP VVGGTGWNSG KRKVDAIDLF ADGAYELFGR QHNMMFGGSY SKQNNRYFSA WANVFPDDIG NFSAFNGNFP QTHWAPQNLA QDDTTHMKSL YAATRISLAD PLHLILGARY TNWRVDTLTY SMEKNHTTPY AGLIYDINDN WSAYASYTSI FQPQNKRDKA GQYLAPITGN NYEAGLKSDW MNSRLTTTLS VFRIEQNNVA QATTIPIPGS NGEFAWKSTD GTVSKGVEFE VNGAITDNWQ MTFGATRYVA EDNEGNAVNP NLPRTSVKLF TRYRLPAMPE LTVGGGVNWQ NRVYKDTTTP YGTFRAEQGS YALVDLFTRY QVTKNFSVQG NINNLFDKTY DTNIDGSIVY GAPRNVSLTA NYQF
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