Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1278 |
Symbol | |
ID | 6518528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1249924 |
End bp | 1250721 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642746399 |
Product | putative metallodependent hydrolase |
Protein accession | YP_002114207 |
Protein GI | 194734591 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.558923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTAG TCGACTCACA CTGCCATCTT GATGGTCTGG ATTATCAATC TTTGCATAAG GACGTGGACG ATGTGCTGGC GAAAGCCGCC GCGCGCGATG TGAAGTTCTG TTTAGCGGTG GCGACGACGC TGCCGGGGTA TCGCCATATG CGCGAGCTGG TGGGCAAGCG CGATAATGTG GTCTTTTCCT GCGGCGTGCA TCCGTTAAAT CAGGATGAAG CGTATGACGT AGAAGAACTG CGCCTCCTTG CTGCAGAAGA CGATGTGGTG GCGATGGGCG AGACCGGGCT TGATTATTTT TACACGCCTG AGACCAAAAT CCGCCAGCAG GCGTCTTTTA TTCATCATAT CCAGATTGGC CGCGAATTGC ATAAACCGGT GATTGTCCAT ACTCGCGACG CGCGTGCCGA TACGCTGGCT ATCCTGCGTG AAGAAAAAGT GACGGATTGC GGCGGCGTAC TACACTGTTT TACAGAAGAC AGAGAAACGG CCGGCAAATT GTTGGATCTG GGGTTTTATA TCTCTTTTTC CGGCATCGTA ACGTTCCGTA ACGCTGAACA GTTGCGTGAT GCGGCGCGCT ATGTGCCGCT GGATCGGTTA TTAGTCGAGA CCGATTCTCC TTATCTGGCG CCGGTGCCGC ATCGCGGTAA AGAGAACCAG CCTGCGATGG TACGCGACGT CGCAGAATAT ATGGCGGTAT TGAAAGGGGT TGCCGTTGAA GAACTGGCGC AGATCACCAC CGATAACTTT GCTCGCCTGT TCCATATTGA CGCGTCTCGC CTGTCATCAA TCCGTTAA
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Protein sequence | MFLVDSHCHL DGLDYQSLHK DVDDVLAKAA ARDVKFCLAV ATTLPGYRHM RELVGKRDNV VFSCGVHPLN QDEAYDVEEL RLLAAEDDVV AMGETGLDYF YTPETKIRQQ ASFIHHIQIG RELHKPVIVH TRDARADTLA ILREEKVTDC GGVLHCFTED RETAGKLLDL GFYISFSGIV TFRNAEQLRD AARYVPLDRL LVETDSPYLA PVPHRGKENQ PAMVRDVAEY MAVLKGVAVE ELAQITTDNF ARLFHIDASR LSSIR
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