Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1273 |
Symbol | |
ID | 6518865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1245490 |
End bp | 1246032 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642746394 |
Product | fimbrial protein |
Protein accession | YP_002114202 |
Protein GI | 194735681 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.567833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.399124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA AATTTGCCGC TGCCGTATTA TTCACCGCAA TGGGGCTTGC TTCGACTGCA ATGGCTCAGG ATGGCCAGGT TAATTTTACC GGCAAAATCA TCGAAGCAGG TTGCAAAATT AACGGCAGTG TTACCAGCTC TCAGGATGTC AAGCTGGGCG AGGTCTCTAA AACAGCGTTT ACCGCCGCTG GCTCAACGGC AGCAACCACC AAGTTTTCAT TGGTATTAAC CGCCTGCCCT GCAGATCTGC TGGGGAAACC GGTTTCCGTA AAATATGACG GTATGCCGGA CACCCTGAAT AACGACTATC TGCAAATTAC CGGTTACGGT ACTACCGGCG TCGCTAAAGG TGTCGCTATC CAGTTGTTGA ATAGCGATAC CAGCGAACTG CCGCTGGGTA CTGAGTCTAA ATCCGTTACC ATTGCCTCCG ATGCGGCAGA AGAAACGAAC CTCGACTTTT TCGCCCGTTA TATCGCGACA GAAGATAGCG TATCAGGCGG CGATGCCAAC GGCGTCGTTA ACTTTACCCT GACCTACAAC TAA
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Protein sequence | MKGKFAAAVL FTAMGLASTA MAQDGQVNFT GKIIEAGCKI NGSVTSSQDV KLGEVSKTAF TAAGSTAATT KFSLVLTACP ADLLGKPVSV KYDGMPDTLN NDYLQITGYG TTGVAKGVAI QLLNSDTSEL PLGTESKSVT IASDAAEETN LDFFARYIAT EDSVSGGDAN GVVNFTLTYN
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