Gene SeSA_A1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1273 
Symbol 
ID6518865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1245490 
End bp1246032 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content50% 
IMG OID642746394 
Productfimbrial protein 
Protein accessionYP_002114202 
Protein GI194735681 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.567833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.399124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA AATTTGCCGC TGCCGTATTA TTCACCGCAA TGGGGCTTGC TTCGACTGCA 
ATGGCTCAGG ATGGCCAGGT TAATTTTACC GGCAAAATCA TCGAAGCAGG TTGCAAAATT
AACGGCAGTG TTACCAGCTC TCAGGATGTC AAGCTGGGCG AGGTCTCTAA AACAGCGTTT
ACCGCCGCTG GCTCAACGGC AGCAACCACC AAGTTTTCAT TGGTATTAAC CGCCTGCCCT
GCAGATCTGC TGGGGAAACC GGTTTCCGTA AAATATGACG GTATGCCGGA CACCCTGAAT
AACGACTATC TGCAAATTAC CGGTTACGGT ACTACCGGCG TCGCTAAAGG TGTCGCTATC
CAGTTGTTGA ATAGCGATAC CAGCGAACTG CCGCTGGGTA CTGAGTCTAA ATCCGTTACC
ATTGCCTCCG ATGCGGCAGA AGAAACGAAC CTCGACTTTT TCGCCCGTTA TATCGCGACA
GAAGATAGCG TATCAGGCGG CGATGCCAAC GGCGTCGTTA ACTTTACCCT GACCTACAAC
TAA
 
Protein sequence
MKGKFAAAVL FTAMGLASTA MAQDGQVNFT GKIIEAGCKI NGSVTSSQDV KLGEVSKTAF 
TAAGSTAATT KFSLVLTACP ADLLGKPVSV KYDGMPDTLN NDYLQITGYG TTGVAKGVAI
QLLNSDTSEL PLGTESKSVT IASDAAEETN LDFFARYIAT EDSVSGGDAN GVVNFTLTYN