Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1255 |
Symbol | |
ID | 6518785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1230436 |
End bp | 1231395 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746377 |
Product | 23S rRNA pseudouridylate synthase C |
Protein accession | YP_002114185 |
Protein GI | 194738103 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0242253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.194151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG AAACGCCATC CGTAAAAATT GTTGCCATCG CCGCTGACGA AGCGGGGCAA CGCATTGATA ACTTTTTGCG CACCCAACTG AAAGGGGTAC CAAAAAGTAT GATTTATCGC ATCTTGCGTA AAGGCGAGGT GCGGGTGAAC AAAAAACGCA TTAAACCGGA ATACAAACTG GAAGCGGGCG ATGAAGTCCG CATTCCGCCG GTTCGCGTTG CTGAACGCGA AGAAGAGGCC GTGTCGCCGC ATTTGCAAAA AGTGGCGGCC TTGGCGGACG TCATTTTGTA TGAAGACGAC CATATTCTGG TGCTGAATAA GCCTTCCGGC ACCGCCGTAC ACGGCGGGAG TGGGTTAAGT TTTGGCGTCA TCGAAGGGCT GCGGGCGTTG CGTCCGGAAG CGCGATTCCT GGAACTGGTG CATCGTCTTG ACCGCGATAC TTCCGGCGTG CTGTTGGTGG CAAAAAAACG TTCCGCGCTG CGTTCGCTGC ATGAGCAACT GCGCGAAAAG GGAATGCAGA AAGATTATCT GGCGCTGGTG CGCGGCCAGT GGCAATCGCA CGTTAAAACC GTACAGGCGC CATTATTAAA GAACATTCTG CAAAGCGGCG AACGCATTGT TCGCGTGAGC CAGGAAGGCA AACCGTCAGA AACGCGCTTC AAGGTGGAAG AGCGCTATGC CTTCGCCACG CTGGTGCGCT GTAGCCCGGT CACGGGCCGT ACGCATCAGA TTCGCGTACA TACCCAATAT GCCGGTCACC CTATTGCGTT CGACGATCGC TACGGCGACC GTGAGTTTGA TCAACAGCTT ACCGAAGCGG GAACCGGACT TAAACGTCTC TTTCTGCACG CCGCGGCGTT GAAGTTCACG CATCCGGGAA CGGGCGAAGT CATGCGCATT GAAGCGCCAA TGGATAACGC CCTGAAGCGC TGTCTGCAGG TGCTGCGTAA CGCAAAATAG
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Protein sequence | MKTETPSVKI VAIAADEAGQ RIDNFLRTQL KGVPKSMIYR ILRKGEVRVN KKRIKPEYKL EAGDEVRIPP VRVAEREEEA VSPHLQKVAA LADVILYEDD HILVLNKPSG TAVHGGSGLS FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLREK GMQKDYLALV RGQWQSHVKT VQAPLLKNIL QSGERIVRVS QEGKPSETRF KVEERYAFAT LVRCSPVTGR THQIRVHTQY AGHPIAFDDR YGDREFDQQL TEAGTGLKRL FLHAAALKFT HPGTGEVMRI EAPMDNALKR CLQVLRNAK
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