Gene SeSA_A1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1234 
SymbolmdtH 
ID6515783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1209367 
End bp1210575 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content56% 
IMG OID642746357 
Productmultidrug resistance protein MdtH 
Protein accessionYP_002114165 
Protein GI194738050 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.182579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCG TCTCGCAGGC GAGGAACCTG GGTAAATATT TTCTTCTCAT CGATAACATG 
TTAGTGGTGC TGGGTTTTTT CGTCGTCTTC CCGCTCATCT CTATTCGCTT TGTCGATCAA 
ATGGGGTGGG CTGCCGTAAT GGTAGGGATC GCGCTCGGCC TGCGCCAGTT TATTCAACAA 
GGTCTGGGCA TTTTTGGCGG CGCCATCGCC GATCGCTTTG GCGCGAAACC GATGATTGTC 
ACCGGTATGC TGATGCGCGC CGCCGGCTTT GCCACTATGG GTATCGCGCA TGAGCCCTGG 
CTCTTGTGGT TTTCCTGCTT TCTTTCCGGT CTCGGCGGTA CGCTTTTCGA CCCGCCGCGC 
TCAGCGCTGG TGGTCAAATT AATTCGTCCG GAGCAACGGG GCCGCTTCTT CTCTCTGTTG 
ATGATGCAGG ACAGCGCGGG TGCGGTGATT GGCGCGCTGC TGGGAAGCTG GTTGCTACAA 
TACGATTTTC GCCTGGTCTG CGCGACGGGC GCTATTTTGT TCATATTATG CGCCCTTTTC 
AACGCATGGC TGCTTCCGGC CTGGAAGCTA TCAACGGTCA GAACGCCGGT GCGTGAAGGA 
ATGCGCCGCG TCATGAGCGA TAAAAGGTTT GTCACCTACG TGCTGACGCT GGCGGGCTAT 
TATATGCTGG CGGTACAGGT CATGTTAATG CTGCCGATTA TGGTAAACGA TATCGCCGGT 
TCGCCTGCTG CCGTGAAATG GATGTACGCT ATCGAAGCGT GTCTCTCGCT GACGTTGCTC 
TACCCGATTG CCCGCTGGAG CGAAAAGCGT TTTCGGCTGG AGCATCGGCT GATGGCTGGT 
TTACTCGTCA TGTCGCTGAG CATGATCCCC ATCGGGATGG TGGGCAATTT ACAACAGCTT 
TTTACGCTTA TTTGCGCTTT CTACATCGGC TCGGTTATCG CCGAACCGGC GCGCGAAACG 
CTCAGCGCGT CGCTCGCGGA CGCGAGGGCG CGGGGAAGCT ATATGGGCTT TAGCCGTCTG 
GGATTAGCCA TTGGCGGCGC GATTGGTTAT ATCGGCGGCG GCTGGTTGTT TGATATGGGT 
AAAGCGCTTG CGCAGCCTGA ACTACCGTGG ATGATGCTCG GTATTATCGG CTTTATCACC 
TTTTTGGCTT TAGGCTGGCA ATTTAGTCAT AAACGCACGC CGCGCCGGAT GCTGGAACCC 
GGCGCCTGA
 
Protein sequence
MSRVSQARNL GKYFLLIDNM LVVLGFFVVF PLISIRFVDQ MGWAAVMVGI ALGLRQFIQQ 
GLGIFGGAIA DRFGAKPMIV TGMLMRAAGF ATMGIAHEPW LLWFSCFLSG LGGTLFDPPR 
SALVVKLIRP EQRGRFFSLL MMQDSAGAVI GALLGSWLLQ YDFRLVCATG AILFILCALF 
NAWLLPAWKL STVRTPVREG MRRVMSDKRF VTYVLTLAGY YMLAVQVMLM LPIMVNDIAG 
SPAAVKWMYA IEACLSLTLL YPIARWSEKR FRLEHRLMAG LLVMSLSMIP IGMVGNLQQL 
FTLICAFYIG SVIAEPARET LSASLADARA RGSYMGFSRL GLAIGGAIGY IGGGWLFDMG 
KALAQPELPW MMLGIIGFIT FLALGWQFSH KRTPRRMLEP GA