Gene SeSA_A1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1231 
SymbolpyrC 
ID6519217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1206821 
End bp1207867 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID642746354 
Productdihydroorotase 
Protein accessionYP_002114162 
Protein GI194738348 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.905188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.395002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC CATCCCAGGT TTTAAAGATC CGCCGCCCGG ACGACTGGCA CGTTCACCTT 
CGCGATGGCG ACATGTTAAA AACGGTCGTA CCCTATACCA GCGAAATTTA TGGTCGCGCT 
ATCGTGATGC CGAACCTGGC GTCCCCCATC ACGACCGTTG ATGCAGCGAT CGCCTACCGC 
CAGCGTATTC TCGATGCGGT GCCCGCCGGG CATGATTTCA CGCCGTTAAT GACCTGCTAT 
TTAACGGATT CGCTCGATGC CGATGAACTG GAGCGTGGTT TCCATGAAGG CGTGTTTACT 
GCGGCTAAGC TTTACCCGGC CAATGCCACC ACTAACTCCA GTCATGGCGT AACGTCAGTC 
GACGCTATCA TGCCGGTACT GGAGCGGATG GAAAAACTCG GAATGCCATT ACTGGTCCAC 
GGTGAGGTGA CCCATGCGGA TGTTGATATC TTCGATCGCG AAGCGCGTTT TATCGACACC 
GTAATGGAAC CGCTACGCCA GCGTCTGACC GCGCTTAAAG TGGTCTTTGA ACACATCACG 
ACCAAAGATG CCGCGCAGTA TGTCCGTGAC GGCAACGACT ACCTGGCGGC TACCATTACG 
CCTCAACATT TAATGTTTAA CCGTAATGAT ATGCTGGTTG GCGGCATTCG TCCTCACCTG 
TACTGTCTGC CGATTCTGAA ACGCAATATT CACCAGCAGG CGTTACGCGA ACTGGTTGCC 
AGTGGTTTTA CGCGCGCCTT CCTGGGGACG GATTCAGCGC CGCATTCACG TCATCGTAAA 
GAGACCAGTT GCGGCTGCGC TGGTTGTTTC AACGCCCCCT CCGCCCTTGG CAGTTATGCC 
GCCGTGTTTG AGGAAATGAA CGCGCTGGCG CACTTTGAAG CGTTCTGTTC ACTCAATGGC 
CCGCAATTCT ATGGCCTGCC AGTGAATACG GGGTGGGTGG AACTGGTTCG CGATGAACAA 
CAGATACCGG AAAATATCGC GCTGGCTGAT GATTCGCTGG TGCCTTTTTT AGCGGGTGAA 
ACAGTACGCT GGTCAGTAAA AAAATAA
 
Protein sequence
MTAPSQVLKI RRPDDWHVHL RDGDMLKTVV PYTSEIYGRA IVMPNLASPI TTVDAAIAYR 
QRILDAVPAG HDFTPLMTCY LTDSLDADEL ERGFHEGVFT AAKLYPANAT TNSSHGVTSV 
DAIMPVLERM EKLGMPLLVH GEVTHADVDI FDREARFIDT VMEPLRQRLT ALKVVFEHIT 
TKDAAQYVRD GNDYLAATIT PQHLMFNRND MLVGGIRPHL YCLPILKRNI HQQALRELVA 
SGFTRAFLGT DSAPHSRHRK ETSCGCAGCF NAPSALGSYA AVFEEMNALA HFEAFCSLNG 
PQFYGLPVNT GWVELVRDEQ QIPENIALAD DSLVPFLAGE TVRWSVKK