Gene SeSA_A1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1198 
Symbol 
ID6518417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1181610 
End bp1182713 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content47% 
IMG OID642746321 
Productputative oxidoreductase YjhC 
Protein accessionYP_002114130 
Protein GI194735338 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.854638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAT ACGGTGTTGT AGGTACGGGT TATTTTGGCG CTGAACTGGC GCGATTTATG 
TCTAAGGTTG AAGGAGCGAA AATCACTGCG ATTTACGATC CGGTAAATGC GGATCCGATA 
GCGAAAGAGC TGAACTGTGT CGCCACTGCA ACGATGGAGG CGCTTTGTAC CCATCCTGAT 
GTGGATTGCG TAATTATTGC TTCACCAAAT TACTTACATA AAGCGCCGGT CATTGCGGCG 
GCTAAAGCGG GTAAACACGT GTTTTGTGAA AAACCTATCG CCTTAAATTA CCAGGATTGT 
AAGGATATGG TTGATGCCTG CAAAGAAGCT GGTGTTACCT TTATGGCGGG TCACGTTATG 
AACTTTTTTC ACGGGGTTCG CCACGCTAAA GCGCTCATCA AAGCCGGTGA AATCGGTGAA 
GTTACACAAG TTCACACTAA ACGTAATGGT TTTGAAGACG TGCAGGATGA GATCTCATGG 
AAGAAGATTC GCGCAAAGTC AGGCGGGCAT CTGTACCATC ACATTCACGA GCTAGATTGT 
ACACTGTTCA TCATGGATGA AACCCCATCC CTGGTTTCAA TGGCGGCGGG GAATGTTGCG 
CACAAAGGTG AAAAATTTGG TGATGAAGAT GATGTTGTCC TAATCACTCT TGAGTTCGAA 
AGCGGTCGTT TCGCGACACT TCAGTGGGGA TCATCGTTCC ACTACCCTGA GCACTATGTA 
TTAATTGAGG GCACGACAGG TGCAATTCTC ATTGATATGC AAAATACGGC TGGTTATCTA 
ATAAAAGCGG GCAAAAAAAC ACACTTTCTT GTGCATGAAA GCCAGGCGGA GGATGACGAT 
CGTCGCAACG GTAACATATC CAGCGAGATG GATGGCGCAA TCGCTTATGG TAAACCCGGT 
AAACGTACGC CGATGTGGCT CTCATCAATT ATGAAACTGG AGATGCAGTA CTTGCATGAT 
GTGATAAACG GTCTGGAGCC AGGCGAGGAG TTTGCTAAAT TGCTAACAGG AGAAGCGGCG 
ACAAATGCCA TTGCTACCGC TGATGCTGCG ACGCTTTCCT CAAACGAGGG GCGCAAAGTA 
AAACTCACTG AAATTCTTGG CTAA
 
Protein sequence
MTKYGVVGTG YFGAELARFM SKVEGAKITA IYDPVNADPI AKELNCVATA TMEALCTHPD 
VDCVIIASPN YLHKAPVIAA AKAGKHVFCE KPIALNYQDC KDMVDACKEA GVTFMAGHVM 
NFFHGVRHAK ALIKAGEIGE VTQVHTKRNG FEDVQDEISW KKIRAKSGGH LYHHIHELDC 
TLFIMDETPS LVSMAAGNVA HKGEKFGDED DVVLITLEFE SGRFATLQWG SSFHYPEHYV 
LIEGTTGAIL IDMQNTAGYL IKAGKKTHFL VHESQAEDDD RRNGNISSEM DGAIAYGKPG 
KRTPMWLSSI MKLEMQYLHD VINGLEPGEE FAKLLTGEAA TNAIATADAA TLSSNEGRKV 
KLTEILG