Gene SeSA_A1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1197 
Symbol 
ID6517807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1180316 
End bp1181596 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content45% 
IMG OID642746320 
Productputative sialic acid transporter 
Protein accessionYP_002114129 
Protein GI194736971 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGCAA AATTCTTCCC GTGGTATAGC GAGATAACAC GTCCACAAAA AAATGCTTTA 
TTTTCAGCAT GGCTGGGTTA CGTTTTTGAT GGCTTCGACT TTATGCTGAT TTTCTACATT 
ATGTATCTGA TCAAGGCTGA CTTAGGATTG ACAGATATGG AGGGCGCATT CCTTGCCACA 
GCGGCCTTTA TTGGGCGACC ATTTGGCGGG GCGCTATTTG GTCTGCTGGC AGATAAATTT 
GGCCGTAAGC CGTTAATGAT GTGGTCGATA GTTGCCTATT CTGTAGGTAC AGGGTTAAGT 
GGCCTGGCTT CCGGTGTAAT TATGCTGACG CTTAGTCGTT TCATTGTCGG TATGGGGATG 
GCGGGGGAGT ATGCTTGCGC TTCTACTTAT GCCGTGGAAA GTTGGCCAAA GCATTTAAAA 
TCTAAAGCGA GCGCATTTCT GGTTTCAGGT TTCGGTATTG GTAACATCAT AGCAGCCTAC 
TTTATGCCTT CATTTGCCGA AGCGTATGGT TGGCGTGCTG CTTTTTTTGT CGGTTTGCTA 
CCCGTTCTTT TAGTAATCTA CATCCGGGCC AGGGCTCCTG AATCTAAAGA GTGGGAAGAA 
GCCAAACTCA GTGGTCTCGG AAAGCACTCA CAAAGTGCCT GGTCAGTTTT CTCTTTGTCA 
ATGAAAGGGC TATTTAATCG AGCTCAATTT CCACTGACAT TATGTGTATT TATTGTTCTG 
TTCTCTATTT TCGGCGCAAA CTGGCCGATC TTTGGTCTAC TGCCTACATA TTTGGCGGGA 
GAGGGCTTTG ATACGGGCGT GGTCTCTAAT TTAATGACGG CGGCGGCATT CGGCACTGTA 
TTGGGAAATA TCGTTTGGGG TCTGTGCGCA GATAGAATTG GTTTGAAGAA AACGTTCAGC 
ATTGGTCTTC TCATGTCCTT TTTATTCATT TTCCCGTTAT TCAGAATTCC GCAAGATAAT 
TATTTAGTGC TGGGCGCATG TTTATTCGGT TTAATGGCGA CTAACGTAGG TGTTGGCGGG 
CTGGTTCCCA AATTCCTCTA CGACTACTTT CCTCTTGAGG TTCGTGGTTT GGGTACCGGG 
CTGATTTATA ATCTTGCTGC GACATCAGGC ACATTCAATT CAATGGCGGC GACCTGGCTT 
GGAATAACAA TGGGGCTAGG CGCTGCGCTA ACGTTCATTG TTGCTTTCTG GACCGCAACA 
ATTCTACTCA TTATTGGTTT ATCCATTCCG GATAGGCTAA AAGCACGTCG TGAAAGTTTT 
CAGTCAACAA AAGAATTTTA A
 
Protein sequence
MIAKFFPWYS EITRPQKNAL FSAWLGYVFD GFDFMLIFYI MYLIKADLGL TDMEGAFLAT 
AAFIGRPFGG ALFGLLADKF GRKPLMMWSI VAYSVGTGLS GLASGVIMLT LSRFIVGMGM 
AGEYACASTY AVESWPKHLK SKASAFLVSG FGIGNIIAAY FMPSFAEAYG WRAAFFVGLL 
PVLLVIYIRA RAPESKEWEE AKLSGLGKHS QSAWSVFSLS MKGLFNRAQF PLTLCVFIVL 
FSIFGANWPI FGLLPTYLAG EGFDTGVVSN LMTAAAFGTV LGNIVWGLCA DRIGLKKTFS 
IGLLMSFLFI FPLFRIPQDN YLVLGACLFG LMATNVGVGG LVPKFLYDYF PLEVRGLGTG 
LIYNLAATSG TFNSMAATWL GITMGLGAAL TFIVAFWTAT ILLIIGLSIP DRLKARRESF 
QSTKEF