Gene SeSA_A1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1196 
Symbol 
ID6516016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1179341 
End bp1180033 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content36% 
IMG OID642746319 
Productoligogalacturonate-specific porin 
Protein accessionYP_002114128 
Protein GI194736391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA ACAGATATCT TCTGGGTATG GTTTCGTTTA TAGAATTTTC ATCATATCTA 
CAAGCGGCAA CCCTTGATTA TCGGCATGAA TATGCTGATA GAACCAGAAT TAATAAAGAC 
CGTATTGCTA TAATTGAAAA ACTTCCTAAC GGCATTGGTT TTTATGTCGA TGCCAGCGTT 
AAATCGGGAG GAGTAGATGG TGAGCAGGAT AAGCATTTAA GCGATCTCGT CGCAAACGCT 
ATAGAACTGG GCGTAAGTTA TAATTATAAA GTTACGGACC ATTTTGTTTT GCAGCCTGGA 
TTTATATTTG AAAGCGGTCC AGATACTTCA ATTTATAAGC CTTATTTAAG GGGGCAATAT 
AATTTTGATT CTGGTGTTTA TATGGCTGGT CGTTACCGCT ATGACTATGC AAGAAAGACA 
GCTAACTACA ATGATGATGA GAAAACGAAT AGATTTGATA CTTATATAGG TTATGTTTTT 
GATGAGTTGA AATTAGAATA TAACTTTACC TGGATGGATA GCGATCAAAT TAAATTTGAT 
AACAAAAAAA CAAACTATGA GCATAATGTG GCTTTAGCCT GGAAACTGAA TAAGTCATTT 
ACACCATACG TTGAGGTTGG AAATGTAGCG GTGAGAAATA ATACCGATGA GAGACAGACC 
CGTTATCGCG TTGGATTACA ATACCACTTT TGA
 
Protein sequence
MKINRYLLGM VSFIEFSSYL QAATLDYRHE YADRTRINKD RIAIIEKLPN GIGFYVDASV 
KSGGVDGEQD KHLSDLVANA IELGVSYNYK VTDHFVLQPG FIFESGPDTS IYKPYLRGQY 
NFDSGVYMAG RYRYDYARKT ANYNDDEKTN RFDTYIGYVF DELKLEYNFT WMDSDQIKFD 
NKKTNYEHNV ALAWKLNKSF TPYVEVGNVA VRNNTDERQT RYRVGLQYHF