| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1172 |
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| Symbol | hpaA |
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| ID | 6517775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1154095 |
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| End bp | 1154991 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642746297 |
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| Product | 4-hydroxyphenylacetate catabolism regulatory protein HpaA |
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| Protein accession | YP_002114106 |
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| Protein GI | 194737210 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | [TIGR02297] 4-hydroxyphenylacetate catabolism regulatory protein HpaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.856893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCCAAC GTGCGATCGC CAATATTGAT ATCAGCAAAG AGTATGACGA AAGCATGGGC
AGTAACGATG TGCATTATCA GTCGTTTGCT CGTATGGCGG ATTTCTTTGG TCGTGATATG
CAGGCGCATC GCCACGACCA GTTTTTTCAA ATGCACTTTC TTGATACCGG GCAGATTGAG
CTACAGCTCG ACGATCATCG CTATTCGGTG CAGGCGCCGC TATTTGTGCT TACGCCGCCC
TCGGTGCCGC ATGCTTTTAT TACCGAATCG GATAGCGATG GCCATGTTCT GACGGTACGC
GAAGAGCTGG TTTGGCCGCT GCTGGAAGTG CTTTATCCCG GCACCAGAGA GGCCTTTGGC
CTGCCGGGAA TCTGCCTGTC GCTGGCGGAT AAACCCAACG AGCTGGCGGC GCTCAAACAT
TACTGGCAGC TAATTGAGCG GGAGTCCACG GAACAACTGG CTGGCTGCGA ACATACCCTG
GTGCTACTGG CGCAGGCGGT ATTTACCTTG CTGTTGCGTA ATGCGAAGCT GGACGATCAC
GCCGCAACCG GGATGCGCGG TGAACTGAAA CTTTTTCAGC GCTTTACCCT GTTAATTGAC
AACCACTTCC ATCAGCACTG GACGGTGCCC GATTATGCCT GCGAGCTGCA TATTACCGAA
TCTCGTTTGA CCGATATTTG CCGACGTTTT GCTAATCGCC CGCCTAAACG CCTGATTTTT
GATCGGCAAT TACGCGAGGC GAAACGACTG CTGCTTTTTT CCGACAATGC TGTCAACGAG
ATCGCCTGGC AATTAGGTTT TAAAGATCCG GCTTATTTCG CCCGTTTCTT TAATCGCCTT
GCTGGCTGTT CTCCTTCGCA GTTTCGCCAA CGTGAAGTTC CCTCTTTTCT CAACTAA
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| Protein sequence | MCQRAIANID ISKEYDESMG SNDVHYQSFA RMADFFGRDM QAHRHDQFFQ MHFLDTGQIE
LQLDDHRYSV QAPLFVLTPP SVPHAFITES DSDGHVLTVR EELVWPLLEV LYPGTREAFG
LPGICLSLAD KPNELAALKH YWQLIEREST EQLAGCEHTL VLLAQAVFTL LLRNAKLDDH
AATGMRGELK LFQRFTLLID NHFHQHWTVP DYACELHITE SRLTDICRRF ANRPPKRLIF
DRQLREAKRL LLFSDNAVNE IAWQLGFKDP AYFARFFNRL AGCSPSQFRQ REVPSFLN
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