Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1171 |
Symbol | hpaX |
ID | 6517957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1152709 |
End bp | 1154085 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642746296 |
Product | 4-hydroxyphenylacetate permease |
Protein accession | YP_002114105 |
Protein GI | 194736359 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR02332] 4-hydroxyphenylacetate permease |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.919479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CATCATCTGC ACTTCCGGAA AGCCCCGAGT CTGTCCGTTC GCACAACGCG CTCAGCACGG GTCAACAAAC CGTCATAAAT AAACTGTTCC GCCGACTGAT CGTATTTTTA TTCGTGTTGT TTATCTTCTC GTTTTTAGAC CGTATCAACA TCGGTTTTGC CGGGTTGACG ATGGGGCAGG ATCTGGGGTT AAGCGCCACC ATGTTTGGCC TTGCCACGAC GCTGTTTTAC GCCACCTACG TCATTTTCGG CATTCCCAGC AACGTGATGT TGAGCATCGT CGGCGCCCGC CGCTGGATTG CGACCATTAT GGTGCTATGG GGCATTGCAT CTACCGCTAC GATGTTCGCG GTGGGACCGA AAAGCCTGTA TGTGCTGCGA ATGCTGGTGG GCATTACCGA AGCGGGCTTT TTGCCAGGAA TATTGCTCTA TTTAACCTAC TGGTTCCCGG CATTTTTCCG CGCCCGCGCC AACGCATTAT TTATGATTGC CATGCCGGCC ACTACCGCAT TGGGGTCGAT TGTCTCCGGC TATATTTTAT CGCTGGACGG CATATTCAAT CTGCATGGAT GGCAGTGGTT ATTCCTGTTG GAAGGATTTC CGTCAGTTTT GTTAGGCATT ATGGTGTGGT TTTACCTGGA TGATACCCCG GCAAAAGCCA AATGGCTGAC GGCAGAGGAT AAAAAATGTT TGCAGGAGAT GATGGATAAT GACCGCCTGA CGCTGGTTCA GCCGGAGGGG GCTATCAGCC ATAACGCCAT GCAGCAGCGT AGTCTGTGGC GCGAAGTATT CACGCCAATT GTACTGATGT ATACGCTGGC CTATTTTTGC CTTACCAATA CGCTTAGCGC CATTAGTATC TGGACGCCGC AAATCCTGAA AAGTTTTAAT GAAGGCAGCA GCAATATCAC CATCGGCCTG CTGGCGGCGA TCCCGCAGAT TTGTACTATT CTGGGCATGA TTTACTGGAG CCGCCATTCG GACAAACATC AGGAGCGTAA ACATCACACG GCGTTGCCGT TCCTGTTTGC CGCCGCGGGC TGGCTGCTGG CGTCGGCGAC CGACCATAAC CTGATCCAGC TCCTGGGGAT CGTGATGGCA TCCACGGGTT CCTTTAGCGC GATGGCGATC TTCTGGACCA CGCCGGATCA GTCGATCAGT TTACGCGCCA GGGCGATAGG CATTGCGGTC ATCAATGCCA CCGGCAATAT TGGCTCCGCA CTCAGCCCAT TTATGATTGG CTGGCTAAAA GATATCACCG GTAGCTTCAA TAGCGGACTC TGGTTTGTCG CTTCTCTGTT AGTCGTCGGC GCTGCCATTA TCTGGCTCAT TCCCATGAAA GCATCGCGTC CGCGCGCCAC CCCTTGA
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Protein sequence | MSDTSSALPE SPESVRSHNA LSTGQQTVIN KLFRRLIVFL FVLFIFSFLD RINIGFAGLT MGQDLGLSAT MFGLATTLFY ATYVIFGIPS NVMLSIVGAR RWIATIMVLW GIASTATMFA VGPKSLYVLR MLVGITEAGF LPGILLYLTY WFPAFFRARA NALFMIAMPA TTALGSIVSG YILSLDGIFN LHGWQWLFLL EGFPSVLLGI MVWFYLDDTP AKAKWLTAED KKCLQEMMDN DRLTLVQPEG AISHNAMQQR SLWREVFTPI VLMYTLAYFC LTNTLSAISI WTPQILKSFN EGSSNITIGL LAAIPQICTI LGMIYWSRHS DKHQERKHHT ALPFLFAAAG WLLASATDHN LIQLLGIVMA STGSFSAMAI FWTTPDQSIS LRARAIGIAV INATGNIGSA LSPFMIGWLK DITGSFNSGL WFVASLLVVG AAIIWLIPMK ASRPRATP
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