Gene SeSA_A1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1170 
SymbolhpaI 
ID6516477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1151845 
End bp1152636 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID642746295 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionYP_002114104 
Protein GI194736536 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG CTTTCAAAGA CGCGTTAAAA GTGGGGCGTC CGCAAATCGG TTTGTGGCTG 
GGGCTTGCCA ACAGTTACAG CGCTGAACTG TTAGCGGGCT CCGGCTTCGA CTGGCTACTG
ATTGACGGTG AACACGCGCC AAACAATGTG CAGACGGTGT TGACCCAGTT GCAGGCGATT
GCGCCTTATC CCAGCCAGCC GGTGGTGCGT CCGTCATGGA ACGATCCGGT ACAGATTAAG
CAACTGCTCG ACGTCGGCGC GCAAACGCTG CTGATACCGA TGGTGCAGAA TGCCGATGAA
GCGCGAAACG CCGTGGCGGC TACGCGTTAT CCGCCTGCCG GTATTCGCGG CGTGGGCAGC
GCGCTGGCGC GGGCATCGCG CTGGAATCGC ATTCCGGACT ATCTCCACCA GGCCAACGAC
GCCATGTGCG TACTGGTGCA GATTGAAACG CGTGAGGCGA TGAGCAATCT GGCGTCAATT
CTCGACGTGG ATGGCATTGA TGGCGTGTTT ATTGGCCCGG CGGATCTCAG CGCCGATATG
GGCTTTGCCG GCAATCCGCA GCACCCGGAA GTGCAGGCGG CGATTGAGAA CGCCATCGTG
CAGATACGCG CGGCGGGGAA AGCGCCGGGG ATTCTGATGG CCAATGAAGC ACTGGCGAAA
CGTTATCTGG AACTGGGGGC GCTATTTGTC GCCGTCGGCG TTGACACCAC GCTGCTGGCG
CGCGGCGCGG AGGCGCTGGC GGCGCGCTTT GGCGCAGAAA AAAAGCTGTC CGGTGCGTCC
GGCGTCTATT AA
 
Protein sequence
MKNAFKDALK VGRPQIGLWL GLANSYSAEL LAGSGFDWLL IDGEHAPNNV QTVLTQLQAI 
APYPSQPVVR PSWNDPVQIK QLLDVGAQTL LIPMVQNADE ARNAVAATRY PPAGIRGVGS
ALARASRWNR IPDYLHQAND AMCVLVQIET REAMSNLASI LDVDGIDGVF IGPADLSADM
GFAGNPQHPE VQAAIENAIV QIRAAGKAPG ILMANEALAK RYLELGALFV AVGVDTTLLA
RGAEALAARF GAEKKLSGAS GVY