| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1166 |
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| Symbol | hpaE |
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| ID | 6519569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1148178 |
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| End bp | 1149644 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642746291 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_002114100 |
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| Protein GI | 194734436 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.608265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.856893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA TAAATCATTG GATTAACGGC AAAAAAGTTG CAGGTAACGA CTACTTCCAA
ACCACTAACC CGGCGACTGG TGACGTGCTG GCGGAAGTGG CCTCCGGCGG TGAAGCAGAA
GTGAACCAGG CTGTCGCGGC GGCCAAAGAG GCGTTCCCGA AATGGGCCAA CCTGCCGATG
AAAGAGCGTG CGCGCCTGAT GCGCCGCCTT GGCGACCTGA TTGACCAGCA TGTGCCGGAA
ATCGCGGCGA TGGAAACCGC CGACACCGGC CTGCCTATTC ACCAGACTAA AAACGTGCTG
ATCCCGCGCG CCTCGCATAA CTTCGAATTC TTCGCCGAAG TGTGCCAGCA GATGAACGGC
AAGACCTATC CTGTTGACGA TAAAATGCTC AATTATACGC TGGTGCAGCC CGTCGGCGTC
TGCGCGCTGG TGTCGCCGTG GAACGTGCCG TTTATGACCG CGACCTGGAA AGTCGCGCCG
TGCCTGGCGC TGGGCAACAC CGCGGTGCTC AAAATGTCCG AGCTGTCGCC GCTGACTGCC
GACAGGCTGG GCGAGCTGGC GCTGGAGGCA GGAATTCCGG CAGGCGTGCT GAACGTGGTG
CAGGGCTATG GCGCGACGGC GGGCGATTCG CTGGTACGCC ACCATGACGT GCGTGCGGTG
TCGTTTACCG GCGGGACCGC CACCGGTCGC AATATCATGA AAAATGCTGG CCTGAAAAAA
TACTCGATGG AGCTGGGCGG CAAATCGCCG GTGCTGATTT TTGAAGATGC CGACATTGAG
CGCGCGCTGG ACGCCGCGCT GTTCACCATC TTCTCGATCA ACGGCGAACG CTGCACCGCC
GGGTCGCGCA TCTTTATCCA GCAGAGCATT TACCCTGAGT TCGTGAAGCG CTTTGCCGAA
CGCGCGAATC GCCTGCGTGT CGGCGATCCG ACCGACCCGA ATACCCAGGT CGGCGCGCTG
ATTAGCCAAC AGCACTGGGA GAAAGTCTCC GGTTATATTC GCCTCGGCAT TGAAGAGGGC
GCAACGCTGC TGGCGGGCGG TGCGGAAAAA CCCACTGACC TGCCTGCGCA TCTGAAAGGC
GGTAACTTCC TGCGCCCAAC CGTGCTGGCC GATGTCGACA ACCGTATGCG CGTCGCGCAG
GAAGAGATCT TTGGGCCGGT CGCCTGCCTG CTGCCATTCA AAGACGAAGC GGAAGGGTTA
CGTTTGGCGA ACGACGTGGA ATACGGTCTG GCCTCTTATA TCTGGACCCA GGACGTGAGC
AAAGTGTTGC GCCTGGCGCG TGGGATTGAA GCCGGCATGG TCTTCGTCAA CACCCAGAAC
GTCCGCGACC TGCGCCAGCC GTTCGGCGGC GTGAAAGCCT CCGGTACCGG GCGCGAAGGC
GGCGAATATA GCTTCGAAGT GTTTGCGGAA ATGAAAAACG TCTGCATCTC AATGGGCGAC
CATCCTATCC CAAAATGGGG AGTTTGA
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| Protein sequence | MKKINHWING KKVAGNDYFQ TTNPATGDVL AEVASGGEAE VNQAVAAAKE AFPKWANLPM
KERARLMRRL GDLIDQHVPE IAAMETADTG LPIHQTKNVL IPRASHNFEF FAEVCQQMNG
KTYPVDDKML NYTLVQPVGV CALVSPWNVP FMTATWKVAP CLALGNTAVL KMSELSPLTA
DRLGELALEA GIPAGVLNVV QGYGATAGDS LVRHHDVRAV SFTGGTATGR NIMKNAGLKK
YSMELGGKSP VLIFEDADIE RALDAALFTI FSINGERCTA GSRIFIQQSI YPEFVKRFAE
RANRLRVGDP TDPNTQVGAL ISQQHWEKVS GYIRLGIEEG ATLLAGGAEK PTDLPAHLKG
GNFLRPTVLA DVDNRMRVAQ EEIFGPVACL LPFKDEAEGL RLANDVEYGL ASYIWTQDVS
KVLRLARGIE AGMVFVNTQN VRDLRQPFGG VKASGTGREG GEYSFEVFAE MKNVCISMGD
HPIPKWGV
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