Gene SeSA_A1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1138 
SymbolhelD 
ID6517495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1125319 
End bp1127373 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content55% 
IMG OID642746265 
ProductDNA helicase IV 
Protein accessionYP_002114075 
Protein GI194735557 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.33905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA AAGCTACTTC TCTTGGAAAA CGTCTGGCGC AACACCCGTA TGATCGTGCC 
GTGATCCTCA ACGCTGGGGT GAAAGTGTCT GGCGACAGGC ATGAATATCT TATTCCATTC
AATCAGTTAT TGGCGATTCA CTGTAAGCGT GGGCTGGTAT GGGGCGAGCT GGAGTTTGTC
CTGCCGGAGG ATAAAGTCGT GCGTTTGCAT GGTACTGAGT GGTCGGAAAC CCAGCAATTC
CATCGCTATC TGGACGCGCA CTGGCGTCGC TGGAGCCAGG AGATGAGTGA TGTCGCCGCG
CAGGCATTGC AGGAGCAATG GGAGCGTATT AGTGAGCGAA CGGGCGAAAA CCAATGGCTT
ACCCGTGAAC GCGTTCGGGG GCTGGAACAC GAAATTCGCC AGACGTTTGC CGCCTTGCCG
CTGCCGGTCT CACGTCTGGA GGAGTTTGCT CACTGTCGCG AGATATGGCG TAAGTGTCTG
GCCTGGTTAC AGGATAGCGA GGGAAGTCGG CAGCAGCATA ATCAGGCGTA TGCTGATGCC
ATGCTGGAAG CGCATGCCGA CTTTTTTACG CAGATAGAAT CTTCTCCGCT TAATCCTTCC
CAGGCCAGGG CGGTGGTTAA CGGCGAATCA TCGTTACTGG TACTGGCGGG CGCGGGAAGC
GGTAAGACCT CGGTGCTGGT GGCGCGCGCG GGTTGGCTGT TGGCGCGCGG ACAAGCAGAT
GCGGGGCAAA TTCTTTTACT GGCGTTTGGT CGCAAGGCGG CAGAGGAGAT GGATGAGCGT
ATCCGCGAGC GCTTACATAC GGAAGAGATT ACTGCCCGTA CGTTCCATTC GCTGGCGCTG
TATATTATTC AGCAAGGCAG TAAAAAAGCG CCGGTTGTCA GTAAGCTGGA AAGTGACGCC
ACCGCGCGGC ATCAGCTATT TCTGCGCACC TGGCGTCAGC AGTGTAGCGA GAAAAAAGCG
CAGGCCAAAG GCTGGCGTCA GTGGCTGGAA GAGGAGATGC AGTGGGTAGT GCCGGAAGGT
AATTTCTGGG ACGATGAGAC ATTGCAGCGG CGTCTGGCCC CTCGCCTGGA TCGTTGGGTC
AGCTTGATGC GTATGCACGG CGGCGCGCAG GCAGAAATGA TCGCTGGCGC GCCAGAGGAG
TGCCGCGAGC TGTTTGGCAA ACGCATTAAG CTGATGGCGC CGCTGCTGAA GGCCTGGAAA
AGCGCGTTGA AAGCGGAAAA TGCCGTTGAT TTCTCCGGTC TGATCCATCA GGCAATGGTG
ATCCTCGAAA AAGGGCGTTT TATCAGCCCG TGGAAGCATA TTCTGGTCGA TGAATTTCAG
GATATTTCCC CGCAACGGGC GGCGCTGTTA GAAGCACTGC GCAAGCAGAA TAGCCAGACT
ACGCTGTTTG CCGTGGGCGA TGACTGGCAG GCGATTTACC GTTTTAGCGG GGCGCAGCTC
TCCTTAACGA CGGCGTTTCA TCAGATGTTC GGCGAGGGCG AGCATTGCCA CCTGGACACC
ACGTACCGTT TTAACAGTCG GATTGGCGAT ATTGCCAATC GCTTTGTACA GCAGAATCCG
CACCAGCTTA AAAAACCGTT AAATAGTCTG ACCCCAGGCG ATAAAAAAGC GGTGACGTTA
TTAGATGAAA GCCAGTTGGA CGCGTTACTG GATAAATTAT CCGGCTATGC GAAGGAAGAT
GAACGTATCC TGGTGCTGGC GCGCTATCAT CATCTGAAAC CCGCGAGTCT ACAAAAAGCG
GCGACTCGCT GGCCGAAGTT ACAGATAGAC TTCATGACTA TCCATGCCAG CAAAGGCCAA
CAGGCCGATT ACGTGATTCT TGTCGGATTG CAGGAGGGTA ACGACGGTTT CCCCGCCCCG
GCGCGAGAAT CCATTATGGA AAGTGCGCTT CTTCCTCAGG TTGAGGATTT TCCGGACGCT
GAAGAGCGGC GTTTGTTATA TGTGGCGTTG ACGCGCGCGC GTGCGCGGGT CTGGCTGCTT
TTTAATAAAG ATAATCCCTC GCGCTTTGTG GAGGCGCTTA AACAGCTGGA TGTGCCGGTG
GCGAGGAAGC CCTAA
 
Protein sequence
MELKATSLGK RLAQHPYDRA VILNAGVKVS GDRHEYLIPF NQLLAIHCKR GLVWGELEFV 
LPEDKVVRLH GTEWSETQQF HRYLDAHWRR WSQEMSDVAA QALQEQWERI SERTGENQWL
TRERVRGLEH EIRQTFAALP LPVSRLEEFA HCREIWRKCL AWLQDSEGSR QQHNQAYADA
MLEAHADFFT QIESSPLNPS QARAVVNGES SLLVLAGAGS GKTSVLVARA GWLLARGQAD
AGQILLLAFG RKAAEEMDER IRERLHTEEI TARTFHSLAL YIIQQGSKKA PVVSKLESDA
TARHQLFLRT WRQQCSEKKA QAKGWRQWLE EEMQWVVPEG NFWDDETLQR RLAPRLDRWV
SLMRMHGGAQ AEMIAGAPEE CRELFGKRIK LMAPLLKAWK SALKAENAVD FSGLIHQAMV
ILEKGRFISP WKHILVDEFQ DISPQRAALL EALRKQNSQT TLFAVGDDWQ AIYRFSGAQL
SLTTAFHQMF GEGEHCHLDT TYRFNSRIGD IANRFVQQNP HQLKKPLNSL TPGDKKAVTL
LDESQLDALL DKLSGYAKED ERILVLARYH HLKPASLQKA ATRWPKLQID FMTIHASKGQ
QADYVILVGL QEGNDGFPAP ARESIMESAL LPQVEDFPDA EERRLLYVAL TRARARVWLL
FNKDNPSRFV EALKQLDVPV ARKP