Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1123 |
Symbol | rlmL |
ID | 6518139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1108772 |
End bp | 1110880 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746251 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_002114061 |
Protein GI | 194737689 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.482785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCTC TGTTTGCCAG TACGGCCCGC GGGCTGGAAG AGCTGTTAAA AACTGAACTG GAAAAACTGG GCGCCGTAGG GTGTCAGGTT GTTCAGGGTG GGGTCCATTT TCAGGGCGAC ACGCGGCTTA TTTACCAGAG CCTGATGTGG AGCCGCCTGG CCTCGCGTAT TATCCTGCCG ATGGGTGAGT GCAAGGTCTA CAGCGATCTC GATCTTTACC TCGGCGTTCA GGCGATAAAC TGGACAGAGA TTTTTAATCC TGGCGCGACG TTTGCGGTGC ATTTCAGCGG CCTGAACGAC ACCATCCGTA ATAGTCAGTA TGGCGCGATG AAAGTTAAAG ACGCGATTGT CGATGCATTT ACGCGGAAAA ATCTTCCGCG TCCAAATGTG GACCGCGAAT CACCGGACCT CCGTATTAAC GTCTGGCTGA ATAAAGAAAC TGCCAGCATT GCGCTGGATC TCAGTGGTGA TGGCCTGCAC CTGCGCGGTT ATCGCGATCG CACCGGGCTG GCGCCAATTA AAGAGACGCT GGCGGCAGCG ATTGTTATGC GTTCCGGCTG GCAACCAGGA ACCCCGCTGC TCGACCCTAT GTGTGGTTCG GGGACTCTGT TGATTGAGGC CGCGATGTGG GCGACCGATC GCGCGCCGGG ACTGCACCGT GGTCACTGGG GATTTAGCGG CTGGGCGCAG CATGACGAGG CTATCTGGCA GGAAGTGAAA GCCGAAGCGC AGACCCGGGC GCGTAAGGGG CTGGCGGAGT ATTCCTCTCA TTTCTACGGT TCCGACAGCG ATGCGCGCGT CATTGAGCGG GCGCGCAGCA ACGCCCGTCG CGCCGGTATC GGGGAGCTTA TCACCTTTGA AGTGAAAGAT GTGGCGCAAC TGAGTAATCC ATTGCCGAAA GGCCCGTATG GTACGGTGAT CAGTAACCCG CCTTACGGCG AACGTCTGGA CAGCGAACCG GCGCTGATTG CGTTGCACAG CCTGCTGGGC CGTACCATGA AAAATCAGTT TGGCGGCTGG AACCTGTCGC TGTTCAGCGC TTCGCCCGAT TTGCTGGGCA GCCTGCAATT GCGTGCCGAC AAACAGTTTA AAGCCAAGAA TGGCCCGCTG GACTGCGTGC AGAAAAACTA TCATATTGCG GAAACCACGG CGGACAGTAA ACCGGCGACG GTGGCGGAAG ATTACGCTAA TCGCCTGCGT AAAAATCTTA AAAAGCTGGA GAAATGGGCG CGCCAGGAAG GGATTGAATG CTATCGCTTG TATGATGCCG ACCTGCCGGA ATATAACGTG GCGGTAGACC GTTACGGCGA CTGGGCGGTG ATTCAGGAAT ATGCGCCGCC GAAAACGGTG GATGCGCAAA AAGCGCGGCA ACGTCTGTTC GATATTATTG CGGCAACCTT GTCAGTGCTC GGTATTCCGC CGAATAAACT GGTGTTAAAA ACCCGTGAAC GACAAAAAGG AAAAAACCAG TATCAGAAAA TGAGCGAGAA GGGCGAGTTC CTTGAGGTCA GCGAATATAA TGCGCGCTTA TGGGTAAATC TGACGGATTA TCTCGACACC GGTCTGTTCC TCGATCACCG TATTGCCCGC AGAATGCTGG GAGAAATGAG CAAAGGCAAA GATTTCCTGA ATCTCTTTTC TTATACCGGC AGCGCCAGCG TACATGCGGG TCTGGGCGGC GCGCGCAGCA CCACAACGGT GGATATGTCC CGCACCTATC TGGAGTGGGC CGAACGTAAT TTGCGTCTGA ACGGACTGAG TGGCCGCGCG CATCGCCTGA TTCAGGCCGA CTGCCTGGGC TGGCTGCGCG AGGCGAATGA ACAGTTCGAT TTGATCTTTA TCGATCCGCC GACGTTCTCT AACTCAAAAC GTATGGAAGA GTCGTTTGAT GTTCAGCGCG ATCATGTCGC GTTAATGAAA GATTTAAAAC GCCTGCTGCG TAAAGGCGGC ACCATCATGT TCTCAAATAA TAAGCGCGGA TTCCGTATGG ATCTGGAAGG GCTGGCGGAA CTGGGGCTTA CCGCACAAGA AATTACGCAA AAAACGCTCT CCCCGGATTT TGCCCGTAAC CGTCAGATTC ATAACTGCTG GCTGATCCGC GCCGCCTGA
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Protein sequence | MNSLFASTAR GLEELLKTEL EKLGAVGCQV VQGGVHFQGD TRLIYQSLMW SRLASRIILP MGECKVYSDL DLYLGVQAIN WTEIFNPGAT FAVHFSGLND TIRNSQYGAM KVKDAIVDAF TRKNLPRPNV DRESPDLRIN VWLNKETASI ALDLSGDGLH LRGYRDRTGL APIKETLAAA IVMRSGWQPG TPLLDPMCGS GTLLIEAAMW ATDRAPGLHR GHWGFSGWAQ HDEAIWQEVK AEAQTRARKG LAEYSSHFYG SDSDARVIER ARSNARRAGI GELITFEVKD VAQLSNPLPK GPYGTVISNP PYGERLDSEP ALIALHSLLG RTMKNQFGGW NLSLFSASPD LLGSLQLRAD KQFKAKNGPL DCVQKNYHIA ETTADSKPAT VAEDYANRLR KNLKKLEKWA RQEGIECYRL YDADLPEYNV AVDRYGDWAV IQEYAPPKTV DAQKARQRLF DIIAATLSVL GIPPNKLVLK TRERQKGKNQ YQKMSEKGEF LEVSEYNARL WVNLTDYLDT GLFLDHRIAR RMLGEMSKGK DFLNLFSYTG SASVHAGLGG ARSTTTVDMS RTYLEWAERN LRLNGLSGRA HRLIQADCLG WLREANEQFD LIFIDPPTFS NSKRMEESFD VQRDHVALMK DLKRLLRKGG TIMFSNNKRG FRMDLEGLAE LGLTAQEITQ KTLSPDFARN RQIHNCWLIR AA
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