Gene SeSA_A1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1089 
Symbol 
ID6518441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1069103 
End bp1069795 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content51% 
IMG OID642746217 
Producthypothetical protein 
Protein accessionYP_002114027 
Protein GI194735109 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TTGATTTGCA ACGAATGGCG CTGGATAACG TGCCGGTAGC GTTTTTGGGG 
GAAGTGGCGC TACGTAGCTT TTACACCTTT GTTCTGGTGT TTCTTTTCTT AAAGGTGACA 
GGACGACGCG GCGTACGGCA AATGTCGCTT TTTGAAGTGC TGATCATTTT GACATTGGGG 
TCGGCGGCAG GCGACGTCGC GTTTTATGAT GACGTTCCGA TGCTCCCTGT TCTGGTGGTA 
TTCATCACCC TGGCGCTGCT CTATCGCCTG GTCATGTGGC TGATGGCGCA TAGTGAAAAG 
TTGGAAGATC TGCTGGAAGG CAAGTCGGTG GTCATTGTTG AAGACGGCGA ACTGGCGTGG 
GAAAAACTGC AGCGCTCGAA CATGACGGAG TTTGAGTTTT TTATGGAGCT TCGCTTGAAT 
GGCGTTGAGC AACTGGGGCA GGTCAGACTG GCCATCCTGG AGACAAACGG ACAAATCAGC 
GTCTATTTCT TTGAAAATAA AGACGTTAAG CCGGGGTTAA GCATTCTTCC TGAGCACTGT 
ACGCCACGCT TTATCGTGGC GCCGGAGGCT GGCGACTATG CCTGCGTACG TTGCAGTGAA 
GTGATACGCA TGAACGTCGG GAAAAAGCAA TTATGTCCGC GCTGCGCAAA TCCAGAATGG 
ACGAAGGCAA GCCGGGCTAA ACGCGTTGTT TAA
 
Protein sequence
MKAFDLQRMA LDNVPVAFLG EVALRSFYTF VLVFLFLKVT GRRGVRQMSL FEVLIILTLG 
SAAGDVAFYD DVPMLPVLVV FITLALLYRL VMWLMAHSEK LEDLLEGKSV VIVEDGELAW 
EKLQRSNMTE FEFFMELRLN GVEQLGQVRL AILETNGQIS VYFFENKDVK PGLSILPEHC 
TPRFIVAPEA GDYACVRCSE VIRMNVGKKQ LCPRCANPEW TKASRAKRVV