Gene SeSA_A1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1088 
Symbol 
ID6518084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1067206 
End bp1069041 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content53% 
IMG OID642746216 
Producthypothetical protein 
Protein accessionYP_002114026 
Protein GI194736995 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.654387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGC GAGATAGCGC CCGTCACATA AAACCCGTAT CATTGCGCGC TTTCCGTACG 
ACAAAAGTGA TTTTCATGAC GCAAACATTT ATTCCCGGCA AAGACGCCGC GCTGGAAGAC
TCCATCGCCC GCTTCCAGCA AAAGTTACTC GACCTCGGCT TTCACATCGA AGAGGCCTCC
TGGCTGAACC CGGTGCCAAA CGTCTGGTCA GTGCATATTC GCGATAAAGA GTGCGCGTTA
TGCTTTACCA ACGGAAAAGG CGCGACCAAA AAAGCGGCGC TGGCCTCGGC GCTGGGCGAA
TACTTCGAGC GTCTGTCAAC CAACTACTTT TTTGCTGATT TCTGGCTTGG CGAAACGGTC
GCCAACGGGC CATTCGTGCA TTATCCGAAT GAAAAATGGT TCCCGCTGAC TGAAAATGAC
GACGTACCGG AAGGCTTGCT TGATGCCCGT CTGCGCGCGT TTTACGATCC GGAAAATGAA
CTCACCGGAA GCCAGTTAAT TGATCTTCAG TCCGGCAATG AAGAACGCGG CGTCTGCGGC
CTGCCATTTA CCCGTCAGTC CGATAACCAG ACCGTGTATA TTCCGATGAA TATTATCGGC
AACCTGTATG TCTCTAACGG AATGTCCGCC GGCAATACGC GTAATGAAGC CCGCGTTCAG
GGACTGTCGG AAGTCTTCGA GCGCTATGTG AAAAATCGCA TCATTGCGGA AAGTATCAGT
CTGCCGGAGA TTCCCGCAGA GGTGATGGCG CGTTATCCGG CGGTAATGGA GTCAATCGCC
ACGCTGGAAG CCGAGGGTTT CCCGATTTTC GCCTATGACG GCTCGCTGGG CGGTAAGTAT
CCGGTTATCT GCGTCGTGCT GTTCAACCCG GCTAACGGTA CCTGCTTTGC TTCTTTTGGC
GCCCATCCTG ACTTTGGCGT TGCGTTGGAA CGTACAGTGA CCGAACTACT CCAGGGACGC
GGTCTGAAAG ATCTTGATGT CTTCACCCCA CCAACGTTCG ATGATGAAGA AGTCGCGGAG
CACACTAATC TGGAGACCCA CTTCATCGAC TCCAGCGGCC TGATTTCCTG GGATCTGTTC
AAACAGGACG CCGATTACCC GTTCACGGAC TGGAGTTTTT CCGGCACTAC CGAAGAAGAA
TTCGCCACGC TGATGGCCAT CTTTGCTGCT GAAGATAAAG AAGTTTACAT TGCCGATTAC
GAGCATCTCG GCGTATACGC CTGTCGTATT ATCGTACCGG GAATGTCTGA TATTTATCCT
GCCGAAGATC TGTGGCTGGC CAACAACAAT ATGGGTAGCC ATCTTCGTGA GACTCTGCTT
TCGCTGCCCG GTAGCGCCTG GAATAAAGAA GACTATCTCA ATCTGATTGA ACAATTGGAT
GAAGAAGGTT TTGACGATTT CACCCGCGTG CGTGAACTGT TGGGTCTGGC GACCGGAGCG
GACAATGGTT GGTATACACT GCGCGTCGGC GAATTAAAAG CAATGCTAGC GTTAGCGGGC
GGCGATTTGG AGCAGGCGCT AATCTGGACA GAATGGACGA TGGAGTTCAA TTCGTCGGTC
TTTAGTCCGG CACGCGCAAA CTATTACCGT TGCCTGCAAA CGCTGCTGCT CCTGTCGCAA
GAAGATGCGC GTCAGCCGCT GCAATATCTC AATGCTTTTA TAAAAATGTA TGGCGCAGAG
GCTGTAGAAG CCGCCAGCGC CGCGCTTAGC GGTGAAGCGG CTTTTTATGG ACTACCGGCT
GTCGACCACG ATCTACAAGC GTTCCCGGCG CATCAGTCCT TGTTAAAAGC GTATGATAAA
TTACAGCGCG CGAAAGCGGC ATACTGGTCA AAATAA
 
Protein sequence
MSRRDSARHI KPVSLRAFRT TKVIFMTQTF IPGKDAALED SIARFQQKLL DLGFHIEEAS 
WLNPVPNVWS VHIRDKECAL CFTNGKGATK KAALASALGE YFERLSTNYF FADFWLGETV
ANGPFVHYPN EKWFPLTEND DVPEGLLDAR LRAFYDPENE LTGSQLIDLQ SGNEERGVCG
LPFTRQSDNQ TVYIPMNIIG NLYVSNGMSA GNTRNEARVQ GLSEVFERYV KNRIIAESIS
LPEIPAEVMA RYPAVMESIA TLEAEGFPIF AYDGSLGGKY PVICVVLFNP ANGTCFASFG
AHPDFGVALE RTVTELLQGR GLKDLDVFTP PTFDDEEVAE HTNLETHFID SSGLISWDLF
KQDADYPFTD WSFSGTTEEE FATLMAIFAA EDKEVYIADY EHLGVYACRI IVPGMSDIYP
AEDLWLANNN MGSHLRETLL SLPGSAWNKE DYLNLIEQLD EEGFDDFTRV RELLGLATGA
DNGWYTLRVG ELKAMLALAG GDLEQALIWT EWTMEFNSSV FSPARANYYR CLQTLLLLSQ
EDARQPLQYL NAFIKMYGAE AVEAASAALS GEAAFYGLPA VDHDLQAFPA HQSLLKAYDK
LQRAKAAYWS K