Gene SeSA_A1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1087 
Symbol 
ID6519451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1065944 
End bp1066759 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content48% 
IMG OID642746215 
Productputative formate transporter FocA 
Protein accessionYP_002114025 
Protein GI194736658 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG TGGCTGAAGA AGCAGGCGTC TATAAAGCAA CGAAACATCC GCTTAAGACT 
TTCTATCTGG CGATTACCGC CGGCGTATTC ATTTCAATTG CCTTTGTTTT TTATATTACT
GCGACAACCG GTACTGGCGC GATGCCTTAT GGCATGGCGA AACTTATCGG GGGTATCTGT
TTCTCTTTGG GACTGATTCT CTGTGTTATT TGCGGCGCTG ATCTTTTCAC CTCTACTGTT
CTGATCGTTG TAGCTAAAGC TAGCGGTCGC ATCACCTGGG GGCAACTGGC TAAAAACTGG
TTAAACGTCT ATTTTGGTAA CCTGATTGGC GCTCTGCTTT TCGTGTTACT GATGTGGCTT
TCCGGCGAGT ATATGACTGC CAACGGTCAA TGGGGACTTA ACGTCCTGCA AACCGCCGAC
CACAAAATGC ACCACACTTT TATTGAAGCT GTCTGCCTCG GTATTCTGGC GAACCTGATG
GTTTGTCTGG CCGTGTGGAT GAGCTATTCA GGTCGTAGCC TGATGGACAA AGCGTTCATC
ATGGTACTGC CCGTCGCCAT GTTTGTCGCC AGCGGTTTTG AGCACAGTAT CGCAAACATG
TTTATGATTC CTATGGGTAT TGTAATACGC GATTTCGCTA CACCGGAGTT TTGGACCGCA
GTCGGTTCGT CTCCGGAAAG TTTTTCTCAC CTGACCGTGA TGAGCTTCAT CACTGATAAC
CTGATTCCGG TCACGATCGG TAATATTATC GGCGGCGGTT TGTTGGTCGG GTTGACATAC
TGGGTCATTT ACCTGCGTGG TAACGAGCAT CATTAA
 
Protein sequence
MAKVAEEAGV YKATKHPLKT FYLAITAGVF ISIAFVFYIT ATTGTGAMPY GMAKLIGGIC 
FSLGLILCVI CGADLFTSTV LIVVAKASGR ITWGQLAKNW LNVYFGNLIG ALLFVLLMWL
SGEYMTANGQ WGLNVLQTAD HKMHHTFIEA VCLGILANLM VCLAVWMSYS GRSLMDKAFI
MVLPVAMFVA SGFEHSIANM FMIPMGIVIR DFATPEFWTA VGSSPESFSH LTVMSFITDN
LIPVTIGNII GGGLLVGLTY WVIYLRGNEH H