| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1078 |
|---|
| Symbol | |
|---|
| ID | 6517251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1053832 |
|---|
| End bp | 1056276 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642746206 |
|---|
| Product | anaerobic dimethyl sulfoxide reductase chain a |
|---|
| Protein accession | YP_002114016 |
|---|
| Protein GI | 194738277 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.965114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA AGATCCCTGA TGCCGTGCTG GCAGCCGAGG TGAGCCGTCG TGGTTTAGTC
AAAACCACCG CGATAGGCGG CCTGGCGATG GCCAGTAGCG CATTTACCCT GCCATTTACC
CGCATCGCTA ACGCCGCAGA GGCGATAAGC CCGGCGAAAA CCGGCGAGAA AGTCGTCTGG
AGCGCCTGTA CGGTAAACTG TGGCAGCCGT TGTCCGCTAC GTATGCATGT TGTGGATGGC
GAAATCAAAT ATGTAGAAAC GGATAATACC GGAAACGATG GTTACGATGG CCTGCACCAG
GTTCGCGCCT GCCTGCGCGG TCGTTCTATG CGTCGTCGCG TCTATAACCC GGATCGGCTC
AAGTATCCGA TGAAGCGCGT CGGCGCGCGC GGCGAAGGTA AATTTGAGCG TATTAGCTGG
GACGAAGCCT ACGATATCAT TGCTACCAAT ATGCAGCGTC TTATCAAAGA GTATGGCAAC
GAGTCCATTT ATCTGAACTA TGGCACGGGT ACGCTGGGCG GCACTTTGAC ACGTTCATGG
CCGCCAGGAA AAACGCTGGT CGCCCGTCTG ATGAACTGCT GCGGCGGTTA TCTTAATCAC
TACGGTGATT ACTCTTCCGC GCAAATCGCA GCGGGTCTGA ATTACACCTA TGGCGGCTGG
GCGGATGGCA ATAGTCCATC CGACATTGAA AACAGTAAGC TGGTGGTGTT GTTTGGTAAT
AACCCTGGCG AAACCCGCAT GAGCGGGGGC GGTGTAACGT ATTATCTTGA ACAGGCGCGG
CAGAAATCAA ACGCGCGGAT GATCATTATC GATCCTCGTT ACACCGACAC CGGCGCCGGT
CGCGAAGATG AGTGGATTCC GATTCGTCCA GGTACCGATG CGGCGCTGGT CAATGGTCTG
GCATATGTCT TAATCACCGA GAACATGGTC GATCAGCCGT TCCTGGACAA ATATTGCGTC
GGTTATGACG AAAAAACCTT GCCTGCCAGC GCGCCGAAAA ACGGTCACTA CAAAGCCTAT
ATTCTGGGCC AGGGTAAAGA CGGTATCGCG AAGACGCCGG AGTGGGCGGC GCAAATTACC
GGTATCCCGG CGGATCGCAT TATTAAGCTG GCGCGAGAAA TCGGCAGTGC TAAACCCGCC
TATATTTGCC AGGGGTGGGG GCCACAGCGT CATGCTAATG GAGAAATCGC CACGCGCGCC
ATCTCAATGC TGGCGATCCT GACGGGTAAT GTTGGGATTA ACGGCGGTAA CAGCGGCGCG
CGCGAAGGGT CTTATGCCCT GCCATTTGAA CGTATGCCCA CGTTAGAAAA CCCGGTTGAA
ACCAGCATCT CCATGTTTAT GTGGACCGAT GCCATTGAAC GCGGCCCGGA AATGACGGCG
CTGCGTGATG GCGTGCGGGG GAAAGATAAG CTGGACGTGC CGATCAAAAT GATCTGGAAC
TATGCTGGCA ACTGTTTGAT TAACCAGCAC TCTGAGATTA ACCGCACCCA CGAAATCCTG
CAGGATGACA AGAAATGCGA AATGATCGTC GTTATCGACT GTCATATGAC ATCGTCGGCA
AAATACGCCG ATATTCTGTT GCCTGATTGC ACTGCTTCTG AGCAGATGGA CTTTGCGCTG
GATGCCTCCT GCGGGAACAT GTCTTACGTT ATCTTCACTG ACCAGGCGAT TAAACCGCGC
TTCGAGTGTA AGACGATTTA TGAGATGACC AGCGAACTGG CGAAACGTCT TGGCGTGGAA
CAACAGTTTA CCGAAGGACG GACGCAAGAA GAGTGGATGC GTCATCTGTA CGAACAGTCG
CGTAAATCCA TTCCGAATCT GCCCACCTTT GAGGAGTTCC GTAAGCAAGG CATCTTCAAA
CAGCGTGACC CCGAAGGCCA CCATGTCGCC TATAAAGACT TCCGCGAAGA TCCGCAAGCG
AATCCACTTA CAACGCCATC GGGCAAGATT GAAATCTATT CACAGGCGTT GGCGGATATC
GCCGCCACCT GGGAGTTGCC GGAAGGTGAC GTGATCGATC CATTACCGAT CTATACGCCA
GGTTTTGAAA ACTATAACGA TCCGCTAACG GATAAATTCC CGCTGCAGTT GACGGGTTTC
CACTATAAAG CGCGTGTGCA TTCCACTTAT GGCAACGTAG ACGTACTGAA AGCCGCCTGT
CGCCAGGAAA TGTGGATTAA CCCAATGGAT GCGCAGAAAC GCGGTATCAA CAATGGCGAT
AAAGTCCGCA TCTTCAACGA TCGCGGCGAA GTACATATCG AGGCTAAAGT GACGCCGCGC
ATGATGCCGG GCGTGGTCGC CCTGGGAGAA GGCGCATGGT ACGACCCGGA TGCAAAACGC
GTGGATCAGG GCGGATGTAT TAACGTACTG ACGACCCAAC GTCCTTCTCC GCTGGCGAAG
GGGAACCCGT CACATACGAA CCTCGTTCAG GTTGAAAAGG CGTAA
|
|---|
| Protein sequence | MKTKIPDAVL AAEVSRRGLV KTTAIGGLAM ASSAFTLPFT RIANAAEAIS PAKTGEKVVW
SACTVNCGSR CPLRMHVVDG EIKYVETDNT GNDGYDGLHQ VRACLRGRSM RRRVYNPDRL
KYPMKRVGAR GEGKFERISW DEAYDIIATN MQRLIKEYGN ESIYLNYGTG TLGGTLTRSW
PPGKTLVARL MNCCGGYLNH YGDYSSAQIA AGLNYTYGGW ADGNSPSDIE NSKLVVLFGN
NPGETRMSGG GVTYYLEQAR QKSNARMIII DPRYTDTGAG REDEWIPIRP GTDAALVNGL
AYVLITENMV DQPFLDKYCV GYDEKTLPAS APKNGHYKAY ILGQGKDGIA KTPEWAAQIT
GIPADRIIKL AREIGSAKPA YICQGWGPQR HANGEIATRA ISMLAILTGN VGINGGNSGA
REGSYALPFE RMPTLENPVE TSISMFMWTD AIERGPEMTA LRDGVRGKDK LDVPIKMIWN
YAGNCLINQH SEINRTHEIL QDDKKCEMIV VIDCHMTSSA KYADILLPDC TASEQMDFAL
DASCGNMSYV IFTDQAIKPR FECKTIYEMT SELAKRLGVE QQFTEGRTQE EWMRHLYEQS
RKSIPNLPTF EEFRKQGIFK QRDPEGHHVA YKDFREDPQA NPLTTPSGKI EIYSQALADI
AATWELPEGD VIDPLPIYTP GFENYNDPLT DKFPLQLTGF HYKARVHSTY GNVDVLKAAC
RQEMWINPMD AQKRGINNGD KVRIFNDRGE VHIEAKVTPR MMPGVVALGE GAWYDPDAKR
VDQGGCINVL TTQRPSPLAK GNPSHTNLVQ VEKA
|
|---|
| |