Gene SeSA_A1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1061 
SymbolcspD 
ID6515322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1032203 
End bp1032424 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content51% 
IMG OID642746189 
Productcold shock domain protein CspD 
Protein accessionYP_002114000 
Protein GI194734305 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID[TIGR02381] cold shock domain protein CspD 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.510663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.839324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG GTACTGTAAA GTGGTTCAAT AATGCCAAAG GGTTTGGTTT CATCTGCCCT 
GAAGGCGGCG GCGAGGATAT TTTCGCCCAT TATTCCACCA TTCAAATGGA TGGTTACAGA 
ACGCTTAAAG CCGGACAGTC TGTCCGGTTT GATGTACACC AGGGGCCAAA AGGCAATCAC 
GCCAGCGTCA TCGTGCCCAT CGAAGCAGAG GCCGTTGCAT AG
 
Protein sequence
METGTVKWFN NAKGFGFICP EGGGEDIFAH YSTIQMDGYR TLKAGQSVRF DVHQGPKGNH 
ASVIVPIEAE AVA