Gene SeSA_A1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1050 
Symbol 
ID6519397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1018025 
End bp1019458 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content58% 
IMG OID642746178 
ProductNAD dependent epimerase/dehydratase family protein 
Protein accessionYP_002113989 
Protein GI194736876 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAAC GCATTCTGGT TCTCGGCGCC AGCGGCTATA TCGGCCAGCA CCTGGTCTGT 
GCGCTAAGTC AGCAAGGGCA TCAGGTGCGG GCGGCGGCGC GGCGCGTCGA ACGTCTGGAA
AAACAGCGCC TCGCCAACGT CAGTTGTCAT AAGGTCGATC TGCACTGGCC GGAAAATTTA
CCCGCGCTGC TTCGCGACAT TGATACCGTT TACTATCTGG TACACGGCAT GGGCGAAGGC
GGCGATTTTA TCGCCCATGA GCGTCAGGCA GCGCTCAACG TGCGCGACGC GCTGCGCCAG
ACGCCGGTTA AGCAACTTAT TTTCCTCAGT TCACTGCAGG CACCGGCGCA TGAGCAATCC
GATCACCTGC GCGCCCGCCA GCTTACGGCT GACACGCTGC GCGACGCAGG CGTGCCGGTG
ACGGAATTAC GCGCCGGGAT CATCGTCGGC GCAGGCTCCG CCGCCTTCGA AGTCATGCGT
GACATGGTTT ACAACCTGCC AATACTCACA CCGCCGCGCT GGGTGCGTTC GCGCACCACG
CCCATCGCCC TGGAAAATTT ACTCTACTAC CTGGTCGGCT TACTGGAGCA CCCTGCGCGC
GAGCATCGGA TTCTGGAAGC CGCCGGGCCG CAGGTATTAA GCTATCAGCA GCAGTTTGAA
CATTTTATGG CCGTCAGCGG TAAACGGCGT CCGCTAATCT CGGTTCCTTT TCCGACCCGC
TGGATTTCGG TCTGGTTTTT AAACGTCATT ACCTCCGTGC CGCCGACTAC CGCAAAAGCC
TTAATCCAGG GGTTAAGGCA CGATTTGCTG GCCGATGACG CCGCGTTAAA AAAGTTGATC
CCCCAAACGC TTATCACCTT TGATGACGCC GTTCGCCGCA CGCTGAAAGA AGAAGAAAAA
CTGGTGAACT CCAGCGACTG GGGCTACGAC GCGCTGGCCT TCGCCCGCTG GCATCCCGAA
TACGGCTATT TTCCAAAGCA GGCGGGCTTT ACCGCGCAGA CCCCGGCCAG CCTATCGGCG
CTCTGGCAGG TCGTAAATCG GCTGGGTGGC AAAGAGGGCT ATTTTTTCGG CAATATTTTG
TGGCAGACGC GCGCCGCGAT GGATCGTCTG GTGGGGCATA AACTGGCGAA AGGCCGCCCG
TCGCATACCT TGCTCAAGCC TGGCGATACG GTAGATAGCT GGAAAGTGAT CATTGTCGAA
CCAGAAAAAC AGCTCACGCT CTTGTTTGGC ATGAAAGCGC CGGGTCTGGG GCGGCTTAGC
TTCACGCTGC ACGATAAAGG TTGCTACCGC GAAATTGACG TGCGCGCCTG GTGGCATCCA
CACGGAATGC CGGGCCTGAT TTACTGGCTA CTGATGATCC CGGCGCACCT GTTTATTTTC
CGGGGAATGG CAAGGCGTAT TGCCCGACTT GCAGAACAAA TCACAGAAAA ATGA
 
Protein sequence
MAQRILVLGA SGYIGQHLVC ALSQQGHQVR AAARRVERLE KQRLANVSCH KVDLHWPENL 
PALLRDIDTV YYLVHGMGEG GDFIAHERQA ALNVRDALRQ TPVKQLIFLS SLQAPAHEQS
DHLRARQLTA DTLRDAGVPV TELRAGIIVG AGSAAFEVMR DMVYNLPILT PPRWVRSRTT
PIALENLLYY LVGLLEHPAR EHRILEAAGP QVLSYQQQFE HFMAVSGKRR PLISVPFPTR
WISVWFLNVI TSVPPTTAKA LIQGLRHDLL ADDAALKKLI PQTLITFDDA VRRTLKEEEK
LVNSSDWGYD ALAFARWHPE YGYFPKQAGF TAQTPASLSA LWQVVNRLGG KEGYFFGNIL
WQTRAAMDRL VGHKLAKGRP SHTLLKPGDT VDSWKVIIVE PEKQLTLLFG MKAPGLGRLS
FTLHDKGCYR EIDVRAWWHP HGMPGLIYWL LMIPAHLFIF RGMARRIARL AEQITEK