Gene SeSA_A1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1041 
SymbolartJ 
ID6519115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1011061 
End bp1011792 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content49% 
IMG OID642746169 
Productarginine ABC transporter periplasmic arginine-binding protein ArtJ 
Protein accessionYP_002113980 
Protein GI194737012 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.385191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TAGTTCTGGC CGCATTACTC GCCTCTTTCG CCACTGGCAG CATCGCCGCT 
GAAAAAATCA ATTTCGGGGT TTCCGCCACC TATCCCCCGT TTGAATCCCT GGATGCGAGT
AATAAAATTG TGGGCTTCGA TATCGATCTG GCAACCGCAT TATGCAAGCA AATGCAGGCA
GAATGTACTT TTACCAATCA TGCTTTCGAT AGTCTTATCC CGGCGCTGAA ATTCAGAAAA
TATGATGCCG TCATTTCCGG AATGGACATT ACCCCGGAGC GCAGTAAGCA GGTCGCCTTT
AGCAATCCCT ATTATGCGAA CTCCGCGCTG GTGATTGCCA AAAAAGACAC CTATAAGACC
TTTACCGATC TAAAAGGTAA GCGTATCGGT ATGGAAAATG GCACCACGCA TCAAAAATAT
CTCCAGGATA AACATCCGGA GGTCAAAACC GTGGCCTACG ACAGCTACCA GAATGCGATT
ATCGACCTGA AAAATGGCCG TATTGACGGT GTCTTTGGCG ATACTGCAGT GGTCAATGAG
TGGCTGAAAA CGAATCCGCA ACTGGGTCCG GCAACAGAGA AAGTGACCGA TCCGCAATAC
TTCGGTACCG GACTTGGCAT CGCGGTGCGC CCGGACAATA AGGCGTTGCT GGAAAAACTG
AATAATGCGC TGGCCGCCAT TAAAGCGGAC GGCACTTATC AGAAAATCAG CGATCAGTGG
TTCCCACAGT AA
 
Protein sequence
MKKLVLAALL ASFATGSIAA EKINFGVSAT YPPFESLDAS NKIVGFDIDL ATALCKQMQA 
ECTFTNHAFD SLIPALKFRK YDAVISGMDI TPERSKQVAF SNPYYANSAL VIAKKDTYKT
FTDLKGKRIG MENGTTHQKY LQDKHPEVKT VAYDSYQNAI IDLKNGRIDG VFGDTAVVNE
WLKTNPQLGP ATEKVTDPQY FGTGLGIAVR PDNKALLEKL NNALAAIKAD GTYQKISDQW
FPQ