Gene SeSA_A1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1033 
SymbolpotI 
ID6519307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1004807 
End bp1005652 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content58% 
IMG OID642746162 
Productputrescine transporter subunit: membrane component of ABC superfamily 
Protein accessionYP_002113973 
Protein GI194735805 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACT TACCGGTCGT TCGCTCGCCC TGGCGCATTC TGATTCTGGT GCTGGGGTTT 
ACTTTTCTCT ATGCGCCGAT GTTAATGTTG GTGATTTACT CGTTTAACAG TTCGAAGCTG
GTGACGGTGT GGGCGGGATG GTCGACGCGC TGGTATGGCG AGCTCTTTCG GGATACCGCC
ATGATGAGCG CAGTGGGCCT AAGCCTGACA ATTGCCGCCT GCGCGGCGAC GATGGCGGTG
GTGCTCGGTA CCATTGCCGC GGTGGTGATG GTGCGATTTG GACGGTTTCG CGGCGCAAAC
GGCTTTGCGT TTATGATCAC CGCGCCGCTG GTGATGCCGG ATGTGATTAC CGGGCTGTCG
CTGCTGCTGC TGTTTGTCGC GCTCGGTCAT GCTATCGGCT GGCCCTCCGA TCGCGGGATG
CTGACCATCT GGTTGGCGCA CGTCACTTTC TGTACCGCCT ATGTGGCAGT GGTGATCGCT
TCGCGATTAC GCGAACTGGA TCGTTCGATT GAAGAGGCGG CGATGGATCT TGGCGCGGCG
CCGTTGAAGG TCTTTTTTGT CATTACGTTA CCGATGATCA TGCCAGCGGT GATCTCGGGC
TGGCTGTTGG CCTTTACGCT TTCCCTTGAC GATCTGGTGA TTGCCAGCTT CGTTTCCGGT
CCCGGCGCCA CCACGCTACC GATGCTAGTT TTCTCCAGCG TGCGCATGGG CGTGAACCCG
GAAATCAACG CGCTGGCGAC GTTAATCCTC GGCGTGGTAG GAATCGTCGG ATTTATTGCC
TGGTACCTGA TGGCGCGAGC GGAAAAACAG CGGATTCGCG ATATCCAGCG TGCAAGACGC
GGCTGA
 
Protein sequence
MNNLPVVRSP WRILILVLGF TFLYAPMLML VIYSFNSSKL VTVWAGWSTR WYGELFRDTA 
MMSAVGLSLT IAACAATMAV VLGTIAAVVM VRFGRFRGAN GFAFMITAPL VMPDVITGLS
LLLLFVALGH AIGWPSDRGM LTIWLAHVTF CTAYVAVVIA SRLRELDRSI EEAAMDLGAA
PLKVFFVITL PMIMPAVISG WLLAFTLSLD DLVIASFVSG PGATTLPMLV FSSVRMGVNP
EINALATLIL GVVGIVGFIA WYLMARAEKQ RIRDIQRARR G