| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1016 |
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| Symbol | |
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| ID | 6516548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 989874 |
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| End bp | 990632 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642746146 |
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| Product | DNA-binding transcriptional repressor DeoR |
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| Protein accession | YP_002113957 |
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| Protein GI | 194737571 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.135969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.413483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGC GACGCGACGA GCGTATTGGT CAATTGCTGC AGGCCTTAAA ACGCAGCGAT
AAACTTCATC TTAAAGAAGC CGCGACCCTG TTGGGCGTCT CTGAAATGAC CATTCGTCGC
GACCTGAACC ATAAAAGCGC GCCTGTCGTG TTGCTGGGCG GCTATATCGT ACTGGAGCCC
CGCAGCGCCA GTCATTATCT GTTAAGCGAT CAAAAATCTC GTCTGGTGGA AGAAAAACGC
CGAGCCGCTC AGTTGGCTGC GGGCCTGGTA CAAGCGCATC AGACGGTATT TATTGACTGT
GGCACCACCA CGCCGTGGAT CATTGAAGCC ATTGATAATG ACCTTCCCTT TACGGCGGTG
TGCTATTCAC TTAATACCTT TCTGGCGCTG CAGGACAAAC CACATTGCCG CGCCATTCTC
AGCGGCGGGG AGTTTCACGC CAGCAACGCC ATTTTCAAAC CGCTTGATTT CCATGAAACG
TTAAACAATA TTTGTCCGGA TATCGCGTTT TATTCCGCCG CCGGCGTTCA TACCAGTAAA
GGCGCTACCT GCTTTAATCT GGAAGAGCTG CCGGTAAAAC ATTGGGCAAT GACAATGGCA
CAGTGCCATG TACTGGTGGT GGATCACAGT AAATTCGGCA AGGTACGTCC GGCGCGGATG
GGGGAACTAT CACGCTTTGA TACGATTATC AGCGACCGCC GTCCCGATGA GGCCTTTGTG
GCCTACGCTA AAGCGCAACA AATTACTCTG ATGTATTAA
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| Protein sequence | METRRDERIG QLLQALKRSD KLHLKEAATL LGVSEMTIRR DLNHKSAPVV LLGGYIVLEP
RSASHYLLSD QKSRLVEEKR RAAQLAAGLV QAHQTVFIDC GTTTPWIIEA IDNDLPFTAV
CYSLNTFLAL QDKPHCRAIL SGGEFHASNA IFKPLDFHET LNNICPDIAF YSAAGVHTSK
GATCFNLEEL PVKHWAMTMA QCHVLVVDHS KFGKVRPARM GELSRFDTII SDRRPDEAFV
AYAKAQQITL MY
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