Gene SeSA_A0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0964 
Symbol 
ID6517464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp936149 
End bp937279 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content54% 
IMG OID642746096 
Productinner membrane transport permease YbhS 
Protein accessionYP_002113907 
Protein GI194736982 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT CTCTCTCCTG GCGCCGCGTG CGTGCGTTGT GCGTCAAAGA GACGCGCCAG 
ATCGTGCGCG ATCCCAGTAG CTGGCTGATT GCGGTGGTGA TCCCGCTGCT GTTGCTGTTT
ATTTTTGGTT ACGGCATTAA CCTTGACTCC AGCAAGCTGC GGGTGGGGAT TCTGCTTGAA
CAGCAAAGCC AGGAGGCGCT GGATTTCACT CATGCGATGA CCGGTTCACC CTATATCGAC
GCGACCATTA GCGATAATCG CCATGAATTA ATTGAAAAAA TGCAGGCCGG ACGCATTCGC
GGACTGGTGG TGATTCCGGT GGATTTCGCG CAGCAAATGG CGCGCGACGG TGACAGCGCG
CCGATTCAGG TGATTACCGA CGGCAGCGAG CCAAACACCG CCAACTTCGT TCAGGGTTAT
GTGGAAGGCA TCTGGCAAAT CTGGCAACAG CAGCGGGCGG AAGATCGCGG CGACACCTTT
GAACCGCTCA TCGACGTCCA GACGCGCTAC TGGTTTAACC CGGCGGCGAT CAGTCAGCAT
TTTATTATTC CCGGGGCGGT GACCATTATC ATGACGGTAA TTGGCGCAAT CCTCACCTCG
CTGGTCGTTG CCCGCGAATG GGAGCGCGGC ACGATGGAGG CGCTGCTCTC AACCGAAGTG
ACGCGTGTTG AACTGCTGCT GTGTAAGCTT ATTCCCTATT ACTTTCTCGG TATGCTGGCG
ATGCTGCTCT GTATGCTGGT ATCGGTGTTT ATTCTCGGCG TGCCGTATCG CGGTTCGCTG
GTGATTCTGT TTATCATCAC CAGTCTGTTT TTACTGAGTA CGCTGGGGAT GGGGCTGTTG
ATTTCCACCA TCACTCGCAA CCAGTTTAAC GCCGCGCAGG TGGCGCTGAA CGCCGCCTTT
TTGCCATCGA TTATGCTGTC CGGATTTATC TTCCAGATAG ACAGTATGCC TGCGGTGATC
CGCGCGGTGA CCTATATTAT TCCGGCGCGC TATTTTGTTA GCACCCTGCA AAGTCTGTTT
CTGGCCGGCA ATATTCCGGT CGTGTTAGGC GTTAACGTAC TGTTTTTAAT CGCCTCGGCG
GTGATGTTTA TTGGCCTGAC GTGGCTAAAA ACCAAACGAC GACTGGATTA A
 
Protein sequence
MSKSLSWRRV RALCVKETRQ IVRDPSSWLI AVVIPLLLLF IFGYGINLDS SKLRVGILLE 
QQSQEALDFT HAMTGSPYID ATISDNRHEL IEKMQAGRIR GLVVIPVDFA QQMARDGDSA
PIQVITDGSE PNTANFVQGY VEGIWQIWQQ QRAEDRGDTF EPLIDVQTRY WFNPAAISQH
FIIPGAVTII MTVIGAILTS LVVAREWERG TMEALLSTEV TRVELLLCKL IPYYFLGMLA
MLLCMLVSVF ILGVPYRGSL VILFIITSLF LLSTLGMGLL ISTITRNQFN AAQVALNAAF
LPSIMLSGFI FQIDSMPAVI RAVTYIIPAR YFVSTLQSLF LAGNIPVVLG VNVLFLIASA
VMFIGLTWLK TKRRLD