| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0959 |
|---|
| Symbol | |
|---|
| ID | 6518260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 931480 |
|---|
| End bp | 932442 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642746091 |
|---|
| Product | inner membrane protein YbhN |
|---|
| Protein accession | YP_002113902 |
|---|
| Protein GI | 194735592 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.262362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAT CGCATCCGCG CTGGCGGCTG GCTAAAAAAG TGCTGACCTG GCTGTTTTTT
ATTGCGGTCG TCGTTCTGCT GGTGGTTTAT GCTAAAAAGG TCGACTGGGG TGATGTCTGG
ACCGTCATCC GCGACTATAA CCGCACGGCG CTTTTAAGCG CTGTAGGACT GGTGATCGTT
AGCTATCTTC TGTACGGCTG CTACGACCTG CTTGGACGGC TTTATTGCGG CCATAAACTG
GCGAAGCGAC AGGTGATGTT GGTATCGTTC GTCTGCTATG CCTTTAACCT GACGCTCAGC
ACCTGGGTCG GCGGGATCGG GATGCGTTAC CGACTATACT CTCGCCTCGG GTTGCCCGGC
AGTACTATCA CGCGCATTTT CTCGCTCAGC ATTACCACTA ACTGGCTGGG CTATATTCTG
CTGGGCGGCA TCATTTTTAC CTTCGGCGTT GTCCAGCTTC CCGACCACTG GTATATCGAT
GAAGGCACGC TACGTATTCT CGGTATCGTT TTATTGTTGA TTATCGCGGT CTATCTGTGG
TTTTGCGCCT TTGCAAAGCG GCGGCATATG ACGATTAAAG GGCAGAAACT GGTGCTGCCA
TCATGGAAAT TCGCGCTGGC GCAGATGGCG ATCTCCAGCG CGAACTGGAT GGCGATGGGC
GCCATCATCT GGCTGCTGAT GGGTCAGGAT GTGAACTATT TCTTTGTGCT GGGCGTACTG
CTGGTGAGCA GTATCGCGGG CGTCATCGTG CATATTCCGG CAGGCATCGG CGTGCTGGAG
GCCGTATTCC TCGCGTTGCT GGCGGGCGAA CATACGTCGC AAGGCACGAT TATCGCCGCC
CTGCTCGCGT ACCGCGTGCT TTACTATTTT ATTCCCCTGT TGCTGGCGCT GGTGTGCTAT
CTGATCCTGG AGAGCCGGGC GAAGAAGCTG CGGGCGAAAA ACGAGCGGGC GATGGCGAAA
TAA
|
|---|
| Protein sequence | MAKSHPRWRL AKKVLTWLFF IAVVVLLVVY AKKVDWGDVW TVIRDYNRTA LLSAVGLVIV
SYLLYGCYDL LGRLYCGHKL AKRQVMLVSF VCYAFNLTLS TWVGGIGMRY RLYSRLGLPG
STITRIFSLS ITTNWLGYIL LGGIIFTFGV VQLPDHWYID EGTLRILGIV LLLIIAVYLW
FCAFAKRRHM TIKGQKLVLP SWKFALAQMA ISSANWMAMG AIIWLLMGQD VNYFFVLGVL
LVSSIAGVIV HIPAGIGVLE AVFLALLAGE HTSQGTIIAA LLAYRVLYYF IPLLLALVCY
LILESRAKKL RAKNERAMAK
|
|---|
| |