| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0945 |
|---|
| Symbol | bioF |
|---|
| ID | 6519130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 917338 |
|---|
| End bp | 918495 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642746077 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_002113888 |
|---|
| Protein GI | 194734987 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0094418 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.966825 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGGC AACAACGCGT CGACGATGCG CTGACGGCGC GTCGGGCGAC GGATACGTTG
CGCCGCCGCT ATGTGGTGTC GCAGGGCGCC GGACGCTGGC TGGTAGCTAA CGGGCGACAG
TATCTTAACT TCTCCAGCAA TGATTACCTC GGCTTAAGTC AACACCCGCA GATTATTCGC
GCCTGGCAAC AGGCAGCGAT GCGTTTTGGC GTCGGCAGCG GCGGGTCGGG TCATATCAGC
GGTTATTCCG TGGCGCACCA GGCGTTAGAG GAGGAACTGG CGCAATGGTT AGGATATCCA
CGCGCGCTAC TGTTTATCTC TGGCTTTGCG GCGAATCAGG CGGTCATTAC CGCCTTAATG
AAAAAAAATG ACCGGATTGT GGCCGACAGG TTGAGTCATG CTTCCCTGCT GGAGGCCGCT
AATCTGAGTC CGGCGCAGCT TCGCCGCTTT ATCCATAACG ATACGCAGCA TCTGTCGCGT
TTACTGCAAT CGCCCTGCGT GGGTCAGCAA CTGGTGGTGA CAGAAGGTGT ATACAGCATG
GACGGCGACA GCGCGCCGCT GGCGGAAATC CAGCACATTG CCCGCAGGCA TCATGCCTGG
CTGTTGGTTG ATGATGCGCA CGGCATCGGC GTGACTGGCG ATGAGGGGCG GGGCACCTGC
TGGCAACGGG GGGTGAAGCC TGAGTTGCTG GTAGTGACTT TCGGTAAGGG GTTTGGCGTC
AGCGGCGCAG CGGTGCTCTG CTCGGAAAGC GTCGCGGATT ATCTGCTGCA ATTTGCCCGC
CATCTGGTTT ACAGCACCAG TATGCCGCCC GCCCAGGCGC AGGCGTTAAG CGCCTCGCTG
GCGGTGATCC GTAGCGATGA AGGTGGTGAA CGGCGCGAAA AACTCGCCGC TCTGGTTCAG
CGCTTTCGGG CCGGCGTTAA CGCGTCCCGA TTTACGCTAC TGAATGCCCA TAGCGCCATC
CAGCCGTTAA TCGTGGGCGA TAACAGCCAT GCATTGCGCC TGGCGGAGGC GCTACGTCAA
CAAGGATGCT GGGCGACGGC GATTCGTCCG CCGACGGTGC CTGTCGGTAC GGCGCGCCTG
CGCTTAACGT TAACGCAGGC GCATGAAGCG TGCGATATAG ACCGTCTGCT GGAGGTGCTG
CATGGCGCAG GTGAATAA
|
|---|
| Protein sequence | MSWQQRVDDA LTARRATDTL RRRYVVSQGA GRWLVANGRQ YLNFSSNDYL GLSQHPQIIR
AWQQAAMRFG VGSGGSGHIS GYSVAHQALE EELAQWLGYP RALLFISGFA ANQAVITALM
KKNDRIVADR LSHASLLEAA NLSPAQLRRF IHNDTQHLSR LLQSPCVGQQ LVVTEGVYSM
DGDSAPLAEI QHIARRHHAW LLVDDAHGIG VTGDEGRGTC WQRGVKPELL VVTFGKGFGV
SGAAVLCSES VADYLLQFAR HLVYSTSMPP AQAQALSASL AVIRSDEGGE RREKLAALVQ
RFRAGVNASR FTLLNAHSAI QPLIVGDNSH ALRLAEALRQ QGCWATAIRP PTVPVGTARL
RLTLTQAHEA CDIDRLLEVL HGAGE
|
|---|
| |