Gene SeSA_A0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0936 
Symbol 
ID6517631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp906450 
End bp907733 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content57% 
IMG OID642746068 
Productputative pectinesterase 
Protein accessionYP_002113879 
Protein GI194738131 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4677] Pectin methylesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACAT TATCGGTTTC CCGTCTGGCG CTGGCACTGG CTTTTGGCGT GACGCTGAGC 
GCCTGTAGCT CTACGCCACC CGATCAGATC CCTTCCGATC AAACCGCGCC TGGCACCGCC 
TCGCGCCCAA TTCTGTCGGC AAATGAAGCG AAAAACTTCG TTGCGGCGCA CTATTTTGCC 
TCCCTGACGC CGAATACCGC CCCGTGGTCA CCGTCGCCGA TTACCCTGCC CGCACAGCCT 
GACTTTGTGG TGGGGCCGGC AGGTACGCCA GGCGTTACGC ACACCTCAAT TCAGGCCGCG 
GTCGATGCGG CAATGGTTAA ACGCACGAAC AAACGCCAGT ACATTGCTAT TATGCCGGGC 
GACTATCAGG GGACCGTGTA TGTTCCCGCC GCGCCGGGAA GTCTGACCCT GTACGGGACC 
GGTGAAAAAC CGATCGATGT GAAAATAGGG ATGGCGATTG ATGGTGAAAT GAGCGTCGCT 
GACTGGCGCC GCGCGGTGAA TCCCGGCGGG AAATATATGC CTGGTAAACC CGCCTGGTAT 
ATGTTCGATA ACTGCCAAAG CAAACACGCC GCGACGATCG GTGTGATGTG TTCTGCCGCG 
TTCTGGTCGC AGAATAACGG TCTGCAGCTA CAAAATCTGA CCATCGAGAA CACGCTGGGC 
GACAGTGTCG ATGCCGGAAA CCATCCGGCG GTGGCGCTGC GTACCGATGG CGACAAAGTC 
CAGATTAACA AGGTCAATAT CCTTGGCCGC CAGAACACCT TCTTTGTGAC CAACAGCGGC 
GTGCAGAACC GTCTGCAAAC CGATCGTCAG CCGCGTACGC TGGTGACGAA CAGCTATATT 
GAAGGCGATG TGGATATGGT TTCCGGACGC GGCGCCGTGG TGTTCGATAA CACCAACTTC 
CAGGTCGTCA ACTCCCGCAC ACAGCAGGAA GCCTACGTCT TCGCCCCGGC GACGCTGTCC 
AATATTTACT ATGGCTTTTT GGCGATCAAC AGCCGCTTTA ACGCCTCCGG CGATGGCGTT 
GCGCAGCTTG GCCGCTCGCT GGATGTCGAC GCCAACACCA ACGGTCAGGT AGTGATCCGC 
GACAGCGTGA TTAACGAGGG CTTCAACGTT GCCAAACCGT GGGCCGACGC GGTCATCTCG 
AAACGTCCGT TTGCCGGAAA TACGGGAACC GTGGATGACA AAGGCGAGGT GCTGCGTAAT 
CTGAACGACA CTAACTACAA CCGCATGTGG GAATACAACA ACCGCGGTGT AGGCAGTAAA 
GTGGTGGCAG AACCTAAGCA GTAA
 
Protein sequence
MNTLSVSRLA LALAFGVTLS ACSSTPPDQI PSDQTAPGTA SRPILSANEA KNFVAAHYFA 
SLTPNTAPWS PSPITLPAQP DFVVGPAGTP GVTHTSIQAA VDAAMVKRTN KRQYIAIMPG 
DYQGTVYVPA APGSLTLYGT GEKPIDVKIG MAIDGEMSVA DWRRAVNPGG KYMPGKPAWY 
MFDNCQSKHA ATIGVMCSAA FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDKV 
QINKVNILGR QNTFFVTNSG VQNRLQTDRQ PRTLVTNSYI EGDVDMVSGR GAVVFDNTNF 
QVVNSRTQQE AYVFAPATLS NIYYGFLAIN SRFNASGDGV AQLGRSLDVD ANTNGQVVIR 
DSVINEGFNV AKPWADAVIS KRPFAGNTGT VDDKGEVLRN LNDTNYNRMW EYNNRGVGSK 
VVAEPKQ