Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0920 |
Symbol | |
ID | 6515651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 890547 |
End bp | 891626 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746052 |
Product | ABC transporter permease |
Protein accession | YP_002113863 |
Protein GI | 194735003 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.421925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTGTC AGGACAAATC ACTTTTAGCC CCCGGTCTCG CTTCCACGCC CGTCATTCCG CGCTATCGCC AGCTCATACG CAAACGGGCC GTGCTCATGT TAGCTATTGC GCTGGCGATG ATGGCTTCAC TGATGGTGGA TGTAACCTGT GGGTCTTCTG GTTTACCGCT CAGTGCGCTG TGGCAGGCGC TTTTCCAGCC GGAAAAGGTG AATGCGGGCA TACACGTTAT TGTCTGGGAT ATTCGTTTAC CCTATGCCCT GATGGCCCTA CTGGTGGGCA TGGCGTTAGG GTTAGCGGGC GCCGAAATGC AAACCATTTT AAATAATCCG CTGGCGACGC CGTTTACCCT CGGCGTATCG TCCGCGGCGG CTTTTGGCGC TGCGCTGGCG ATTGTGTTGG GGATCGGTAT TCCCGGTATT CCAGCCGCCT GGTTTATCCC GGCCAATGCG TTCATCTTTG CGCTTTTATC CGCGTTACTA CTGGACGGTA TTACCCGTTG GACAGGCGTC GCCGCATCCG GAGTGGTGTT GTTCGGCATT GCGCTGGTAT TCACCTTTAA CGCGTTGGTC GCCATTATGC AGTTTGTGGC TGATGAAGAT ACGCTGCAGG GGCTGGTATT CTGGACGATG GGGAGCCTGG TCCGTGCGTC GTGGGAAAAA TTGGGCGTAC TGGCCGTGGT GTTTATTGCT GTGCTTTTTT GCGCGTTACG AAGCGCCTGG CAACTCACGG CATTACGTTT GGGCGAAGAG AGGGCGATGA GCTTTGGGAT TCATGTCCGC CGTTTACGCC TGCTGTCATT GTTGCGTATC AGCTTGTTAT CAGCGCTGGC GGTAGCTTTC GTCGGGCCGA TTGGTTTTAT TGGTCTCGTT GCACCGCACA TTGCGCGAAT ACTTTTGGGG GAAGATCACC GTTTCTACCT TCCGGGCAGC GTGCTGATAG GCGGGCTGGT GTTATCGCTG GCCTCTATTG CGGCGAAAAA TAGTGTTCCG GGCGTCATGG TGCCGGTGGG GATTGTCACC TCGCTGATCG GGGTTCCGTT CTTTTTAAGC ATTATATTGC GACATCGGGG GAGTCTCTGA
|
Protein sequence | MTCQDKSLLA PGLASTPVIP RYRQLIRKRA VLMLAIALAM MASLMVDVTC GSSGLPLSAL WQALFQPEKV NAGIHVIVWD IRLPYALMAL LVGMALGLAG AEMQTILNNP LATPFTLGVS SAAAFGAALA IVLGIGIPGI PAAWFIPANA FIFALLSALL LDGITRWTGV AASGVVLFGI ALVFTFNALV AIMQFVADED TLQGLVFWTM GSLVRASWEK LGVLAVVFIA VLFCALRSAW QLTALRLGEE RAMSFGIHVR RLRLLSLLRI SLLSALAVAF VGPIGFIGLV APHIARILLG EDHRFYLPGS VLIGGLVLSL ASIAAKNSVP GVMVPVGIVT SLIGVPFFLS IILRHRGSL
|
| |